RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 LRRC20Q8TCA0 184 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 SCGB1C1Q8TD33 95 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 AQP10Q96PS8 301 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 PARD6GQ9BYG4 376 aaPredicted RBP10.61□□□□□ -0.71
VRK3-206ENST00000594090 HRH4Q9H3N8 390 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 WFDC1Q9HC57 220 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
VRK3-206ENST00000594090 SLC17A3O00476 420 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 SNRPCP09234 159 aaKnown RBP10.6□□□□□ -0.71
VRK3-206ENST00000594090 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 CSNK1G2-AS1Q8NCQ2 148 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 ZNF738Q8NE65 137 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
VRK3-206ENST00000594090 ZNF331Q9NQX6 463 aaPredicted RBP10.6□□□□□ -0.71
VRK3-206ENST00000594090 A8MTW9 85 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 H3BQ15 152 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 H3BTX0 84 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 ZFAND6Q6FIF0 208 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
VRK3-206ENST00000594090 FXYD7P58549 80 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 PSG3Q16557 428 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 GUK1Q16774 197 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 FFAR4Q5NUL3 377 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 SAT2Q96F10 170 aaPredicted RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 C11orf68Q9H3H3 251 aaKnown RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 TMEM14CQ9P0S9 112 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 DNAH7Q8WXX0 4024 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 ZNF705EA8MWA4 302 aaPredicted RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 CNN1P51911 297 aaKnown RBP10.58□□□□□ -0.72
VRK3-206ENST00000594090 PSG9Q00887 426 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 AMTNQ6UX39 209 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 MFFQ9GZY8 342 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 ZNF586Q9NXT0 402 aa10.58□□□□□ -0.72
VRK3-206ENST00000594090 FXYD6-FXYD2A0A087WZ82 144 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 G3V3Q6 166 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 ZNF253O75346 499 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 ZNF705DP0CH99 300 aaPredicted RBP10.57□□□□□ -0.72
VRK3-206ENST00000594090 ZNF705BP0CI00 300 aaPredicted RBP10.57□□□□□ -0.72
VRK3-206ENST00000594090 PYYP10082 97 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 ZNF266Q14584 549 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 Q8NAQ8 132 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 OR8A1Q8NGG7 326 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 FAM167A-AS1Q96KT0 104 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 X6R8D5 127 aa10.57□□□□□ -0.72
VRK3-206ENST00000594090 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
VRK3-206ENST00000594090 PRB4P10163 310 aaPredicted RBP10.56□□□□□ -0.72
VRK3-206ENST00000594090 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
VRK3-206ENST00000594090 HIST1H1AQ02539 215 aaPredicted RBP10.56□□□□□ -0.72
VRK3-206ENST00000594090 INO80EQ8NBZ0 244 aaPredicted RBP10.56□□□□□ -0.72
VRK3-206ENST00000594090 RPUSD4Q96CM3 377 aaKnown RBP10.56□□□□□ -0.72
VRK3-206ENST00000594090 TNFSF18Q9UNG2 199 aa10.56□□□□□ -0.72
VRK3-206ENST00000594090 FUT9Q9Y231 359 aa10.56□□□□□ -0.72
VRK3-206ENST00000594090 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
VRK3-206ENST00000594090 DEFB4AO15263 64 aa10.55□□□□□ -0.72
VRK3-206ENST00000594090 MIFP14174 115 aa10.55□□□□□ -0.72
VRK3-206ENST00000594090 PDE6HQ13956 83 aa10.55□□□□□ -0.72
VRK3-206ENST00000594090 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
VRK3-206ENST00000594090 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
VRK3-206ENST00000594090 NDUFB4O95168 129 aa10.54□□□□□ -0.72
VRK3-206ENST00000594090 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
VRK3-206ENST00000594090 ZNF705AQ6ZN79 300 aaPredicted RBP10.54□□□□□ -0.72
VRK3-206ENST00000594090 BLNKQ8WV28 456 aa10.54□□□□□ -0.72
VRK3-206ENST00000594090 OR51M1Q9H341 326 aa10.54□□□□□ -0.72
VRK3-206ENST00000594090 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 M0R2Z0 102 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 AMBPP02760 352 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 RBMY1A1P0DJD3 496 aaKnown RBP10.53□□□□□ -0.72
VRK3-206ENST00000594090 RBMY1CP0DJD4 496 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 RHOBP62745 196 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 RBMY1FQ15415 496 aaKnown RBP10.53□□□□□ -0.72
VRK3-206ENST00000594090 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
VRK3-206ENST00000594090 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 FXYD5Q96DB9 178 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
VRK3-206ENST00000594090 STARD9Q9P2P6 4700 aa10.52□□□□□ -0.72
VRK3-206ENST00000594090 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 SMLR1H3BR10 107 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 OR7C2O60412 319 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 OR10J4P0C629 311 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 M6PRP20645 277 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 PMS2P11Q13670 270 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 KHDC3LQ587J8 217 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 MRPL53Q96EL3 112 aaKnown RBP10.52□□□□□ -0.73
VRK3-206ENST00000594090 ZNF503Q96F45 646 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 GOLT1BQ9Y3E0 138 aa10.52□□□□□ -0.73
VRK3-206ENST00000594090 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
VRK3-206ENST00000594090 M0R3E3 92 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms