RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ANXA2RQ3ZCQ2 193 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 MUC21Q5SSG8 566 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 C1orf194Q5T5A4 169 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 AADACL3Q5VUY0 350 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 OR8G2PQ6IF36 304 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 PHF5AQ7RTV0 110 aaKnown RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP11-1Q8IUC1 163 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 C15orf54Q8N8G6 183 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 OR4C5Q8NGB2 326 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 OR52I2Q8NH67 350 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 TYMSOSQ8TAI1 123 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 FCAMRQ8WWV6 532 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 NPIPB3Q92617 1050 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 RPUSD4Q96CM3 377 aaKnown RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 CENPNQ96H22 339 aaPredicted RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 ACY3Q96HD9 319 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 HOPXQ9BPY8 73 aaPredicted RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 TMEM109Q9BVC6 243 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 SAR1AQ9NR31 198 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 AP5S1Q9NUS5 200 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 CKLFQ9UBR5 152 aa1.69□□□□□ -2.14
VRK3-204ENST00000593912 ELF5Q9UKW6 265 aaPredicted RBP1.69□□□□□ -2.14
VRK3-204ENST00000593912 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 C7orf71A4D174 169 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 GAGE12JA6NER3 117 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 FABP12A6NFH5 140 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 ZAR1LA6NP61 321 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 TSHBP01222 138 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 CRPP02741 224 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 SNRPCP09234 159 aaKnown RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 H2AFB1P0C5Y9 115 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 H2AFB2P0C5Z0 115 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 UBBP0CG47 229 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 PTHLHP12272 177 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 COX4I1P13073 169 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 LGALS3P17931 250 aaKnown RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 CXCL3P19876 107 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 DAPP51397 102 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 HSPE1P61604 102 aaKnown RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 RPS11P62280 158 aaKnown RBP eCLIP1.68□□□□□ -2.14
VRK3-204ENST00000593912 Q0VG73 95 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 GAGE1Q13065 139 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 GAGE4Q13068 117 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 GAGE5Q13069 117 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 CATR1Q13166 79 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 KLF9Q13886 244 aaPredicted RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 P2RY14Q15391 338 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 GAGE13Q4V321 117 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 PCOTHQ58A44 107 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 HACD4Q5VWC8 232 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 ZNF818PQ6ZRF7 136 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 H2BFWTQ7Z2G1 175 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 FAM89BQ8N5H3 189 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 ACBD7Q8N6N7 88 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 ZBTB8BQ8NAP8 495 aaPredicted RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 CLRN3Q8NCR9 226 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 SLC24A4Q8NFF2 622 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 OR56B1Q8NGI3 324 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 OR4A16Q8NH70 328 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 RRNAD1Q96FB5 475 aaKnown RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 CENPOQ9BU64 300 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 SAMD10Q9BYL1 202 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 PRRG3Q9BZD7 231 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 ARGLU1Q9NWB6 273 aaPredicted RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 FKBP11Q9NYL4 201 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 NKIRAS1Q9NYS0 192 aa1.68□□□□□ -2.14
VRK3-204ENST00000593912 CARHSP1Q9Y2V2 147 aaKnown RBP1.68□□□□□ -2.14
VRK3-204ENST00000593912 IGLV10-54A0A075B6I4 117 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 IGKV1D-37A0A075B6S9 117 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 A0A087WX48 190 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 PGPA6NDG6 321 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 FAM24AA6NFZ4 105 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 CORTO00230 105 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 RGS13O14921 159 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 RLN1P04808 185 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 SEC11BP0C7V7 166 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 SMIM18P0DKX4 95 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 SPRR2EP22531 72 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 PSMB9P28065 219 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 RNASE4P34096 147 aaKnown RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 SPRR2BP35325 72 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 SPRR2AP35326 72 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 POLR2IP36954 125 aaKnown RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 RPL5P46777 297 aaKnown RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 AMTP48728 403 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 FXYD4P59646 89 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 EIF5AP63241 154 aaKnown RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 SRPXP78539 464 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 RHOHQ15669 191 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 Q499Y3 187 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 PRR9Q5T870 116 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 DHRSXQ8N5I4 330 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 NKAIN3Q8N8D7 197 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 LINC00304Q8N9R0 145 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 OR4D10Q8NGI6 311 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 C16orf45Q96MC5 204 aaPredicted RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 SLC29A1Q99808 456 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 SLC50A1Q9BRV3 221 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms