RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC38A11Q08AI6 406 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 OXA1LQ15070 435 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 C1orf134Q5TEV5 83 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 TEPPQ6URK8 271 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 GPR82Q96P67 336 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 SLC25A22Q9H936 323 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 RPRMQ9NS64 109 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 DOK5Q9P104 306 aa10.46□□□□□ -0.73
PNKP-202ENST00000593706 TRAV8-2A0A0B4J237 113 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 C5orf51A6NDU8 294 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 HYPMO75409 117 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 GALR1P47211 349 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 VWC2Q2TAL6 325 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 NRARPQ7Z6K4 114 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 C16orf92Q96LL3 132 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 UHRF2Q96PU4 802 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 MGST2Q99735 147 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 RSG1Q9BU20 258 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 MGAT4CQ9UBM8 478 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 HIGD1AQ9Y241 93 aa10.45□□□□□ -0.74
PNKP-202ENST00000593706 LSM5Q9Y4Y9 91 aaKnown RBP10.45□□□□□ -0.74
PNKP-202ENST00000593706 A0A0J9YX75 114 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 AGPAT2O15120 278 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 MRPS12O15235 138 aaKnown RBP10.44□□□□□ -0.74
PNKP-202ENST00000593706 ZNF546Q86UE3 836 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 C1orf158Q8N1D5 194 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 C15orf53Q8NAA6 179 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 ENKURQ8TC29 256 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 ATG101Q9BSB4 218 aa10.44□□□□□ -0.74
PNKP-202ENST00000593706 LYRM2Q9NU23 88 aaPredicted RBP10.44□□□□□ -0.74
PNKP-202ENST00000593706 A0A087X0K7 114 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 IGSF23A1L1A6 192 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 L7N2F9 121 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 CAV2P51636 162 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 VAMP2P63027 116 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 RAB32Q13637 225 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 AMTNQ6UX39 209 aa10.43□□□□□ -0.74
PNKP-202ENST00000593706 FAM24AA6NFZ4 105 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 CST7O76096 145 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 S100A7P31151 101 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 RAP2BP61225 183 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 PXDC1Q5TGL8 231 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 TMEM252Q8N6L7 170 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 IGF2BP2-AS1Q96M15 143 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 MARVELD1Q9BSK0 173 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 ARL6Q9H0F7 186 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 ARV1Q9H2C2 271 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
PNKP-202ENST00000593706 INSP01308 110 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 OR5G3P0C626 314 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 RPL7P18124 248 aaKnown RBP10.41□□□□□ -0.74
PNKP-202ENST00000593706 SULT1A1P50225 295 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 FAM3BP58499 235 aaPredicted RBP10.41□□□□□ -0.74
PNKP-202ENST00000593706 S100A10P60903 97 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 MORN5Q5VZ52 161 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 IGFL4Q6B9Z1 124 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 TMEM37Q8WXS4 190 aa10.41□□□□□ -0.74
PNKP-202ENST00000593706 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 M0R2Z0 102 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 PRAF2O60831 178 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 BCAP31P51572 246 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 SPINK13Q1W4C9 94 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 CHAC2Q8WUX2 184 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 GPN1Q9HCN4 374 aaPredicted RBP10.4□□□□□ -0.74
PNKP-202ENST00000593706 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
PNKP-202ENST00000593706 LYRM9A8MSI8 78 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
PNKP-202ENST00000593706 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 INMT-MINDY4F8WBC2 141 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 GOSR2O14653 212 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 SIX6O95475 246 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 DEFB130BP0DP73 79 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 DEFB130AP0DP74 79 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 CXCL3P19876 107 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 PVALBP20472 110 aaPredicted RBP10.39□□□□□ -0.75
PNKP-202ENST00000593706 CAMLGP49069 296 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 CNN1P51911 297 aaKnown RBP10.39□□□□□ -0.75
PNKP-202ENST00000593706 H2BFSP57053 126 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 LINC00305Q7Z4B0 112 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 NMES1Q9C002 83 aa10.39□□□□□ -0.75
PNKP-202ENST00000593706 H0YIZ8 118 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
PNKP-202ENST00000593706 NUDT3O95989 172 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 S100A11P31949 105 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 TNP2Q05952 138 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 FGL1Q08830 312 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 OPCMLQ14982 345 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 MIC13Q5XKP0 118 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 STX12Q86Y82 276 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 KRTAP4-5Q9BYR2 181 aa10.38□□□□□ -0.75
PNKP-202ENST00000593706 UBE2L5PA0A1B0GUS4 154 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 F5H768 121 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 COX7A2P2O60397 106 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 IGLC2P0DOY2 106 aa10.37□□□□□ -0.75
PNKP-202ENST00000593706 CXCL2P19875 107 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms