RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 TMEM88Q6PEY1 159 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 BAP18Q8IXM2 172 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 C20orf85Q9H1P6 137 aa9.4□□□□□ -0.9
APOC1-209ENST00000592885 PRSS29PA6NIE9 313 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 GOSR2O14653 212 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 MRPS12O15235 138 aaKnown RBP9.39□□□□□ -0.91
APOC1-209ENST00000592885 RTL8CO15255 209 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 TAS2R60P59551 318 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 SOHLH1Q5JUK2 328 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 Q6ZR54 194 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 BPIFA4PQ86YQ2 179 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
APOC1-209ENST00000592885 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 C7orf66A4D0T2 115 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
APOC1-209ENST00000592885 AGPAT2O15120 278 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 MBPP02686 304 aaPredicted RBP9.38□□□□□ -0.91
APOC1-209ENST00000592885 CDKN1BP46527 198 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 RHOBP62745 196 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 ZNF846Q147U1 533 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 LINC00305Q7Z4B0 112 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 RPUSD4Q96CM3 377 aaKnown RBP9.38□□□□□ -0.91
APOC1-209ENST00000592885 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 ZNF331Q9NQX6 463 aaPredicted RBP9.38□□□□□ -0.91
APOC1-209ENST00000592885 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 GSKIPQ9P0R6 139 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 NACAE9PAV3 2078 aa9.38□□□□□ -0.91
APOC1-209ENST00000592885 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 PLAC8L1A1L4L8 177 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 L7N2F9 121 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 M0R2N4 97 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 COX7A2P2O60397 106 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 VAMP2P63027 116 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 RAB31Q13636 194 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 MGST2Q99735 147 aa9.37□□□□□ -0.91
APOC1-209ENST00000592885 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 LYRM1O43325 122 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 ATP5G1P05496 136 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 ATP5G3P48201 142 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
APOC1-209ENST00000592885 LINC01587Q99440 93 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
APOC1-209ENST00000592885 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 CBY3A6NI87 242 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 H7BYZ3 331 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 TCRBP04435 133 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 DEFB130BP0DP73 79 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 DEFB130AP0DP74 79 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 PVALBP20472 110 aaPredicted RBP9.35□□□□□ -0.91
APOC1-209ENST00000592885 CAMLGP49069 296 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 GUK1Q16774 197 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 Q6ZRG5 221 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 OR1L4Q8NGR5 311 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 RNASE8Q8TDE3 154 aaKnown RBP9.35□□□□□ -0.91
APOC1-209ENST00000592885 ZNF431Q8TF32 576 aaPredicted RBP9.35□□□□□ -0.91
APOC1-209ENST00000592885 TMEM37Q8WXS4 190 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 ATG101Q9BSB4 218 aa9.35□□□□□ -0.91
APOC1-209ENST00000592885 LSM5Q9Y4Y9 91 aaKnown RBP9.35□□□□□ -0.91
APOC1-209ENST00000592885 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
APOC1-209ENST00000592885 DNAH2Q9P225 4427 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 CCSO14618 274 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 PLA2G10O15496 165 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 ZNF253O75346 499 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 AZU1P20160 251 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 CAV2P51636 162 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 OPCMLQ14982 345 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 ODF3Q96PU9 254 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 PFDN5Q99471 154 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 UQCC1Q9NVA1 299 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 PTTG2Q9NZH5 202 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 WDR83OSQ9Y284 106 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
APOC1-209ENST00000592885 F5H768 121 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 SLC17A3O00476 420 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 PRM2P04554 102 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 BCAP31P51572 246 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 CCDC32Q9BV29 185 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 C11orf1Q9H5F2 150 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 DNAJC4Q9NNZ3 241 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 NUDT15Q9NV35 164 aa9.33□□□□□ -0.92
APOC1-209ENST00000592885 TRAV6A0A075B6T7 132 aa9.32□□□□□ -0.92
APOC1-209ENST00000592885 C5orf51A6NDU8 294 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms