RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 OR4C46A6NHA9 309 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 H3BRN7 92 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 DNASE2O00115 360 aaPredicted RBP4.8□□□□□ -1.64
VPS4B-205ENST00000591383 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
VPS4B-205ENST00000591383 C8orf88P0DMB2 117 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 S100A7P31151 101 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 ZFP69Q49AA0 526 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 FFAR4Q5NUL3 377 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 C10orf113Q5VZT2 155 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 SIGLEC15Q6ZMC9 328 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 Q6ZRG5 221 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 S100A7AQ86SG5 101 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 TCTE3Q8IZS6 198 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 OR8I2Q8N0Y5 310 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 OR1L4Q8NGR5 311 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 MRAPQ8TCY5 172 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 PFDN5Q99471 154 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
VPS4B-205ENST00000591383 WFDC10AQ9H1F0 79 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 ARV1Q9H2C2 271 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 VSIRQ9H7M9 311 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 UBQLN2Q9UHD9 624 aa4.8□□□□□ -1.64
VPS4B-205ENST00000591383 TRAV25A0A0B4J276 109 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 KANTRA0A1W2PQU2 76 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 RHODO00212 210 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 BCL2L11O43521 198 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 ZNF688P0C7X2 276 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 GALR1P47211 349 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 RPL29P47914 159 aaKnown RBP4.79□□□□□ -1.64
VPS4B-205ENST00000591383 PAFAH1B2P68402 229 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 CD300CQ08708 224 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 GCSAMLQ5JQS6 135 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 PXDC1Q5TGL8 231 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 RPL7L1Q6DKI1 246 aaKnown RBP4.79□□□□□ -1.64
VPS4B-205ENST00000591383 LINC00305Q7Z4B0 112 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 OR11H4Q8NGC9 324 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 FAM110AQ9BQ89 295 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 NEURL2Q9BR09 285 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 SHANK2-AS3Q9BTD1 123 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
VPS4B-205ENST00000591383 SH3BGRL3Q9H299 93 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 MS4A6AQ9H2W1 248 aa4.79□□□□□ -1.64
VPS4B-205ENST00000591383 ZNF98A6NK75 572 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 K7EIL1 84 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 BUB3O43684 328 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 C1QBP02746 253 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 CD5P06127 495 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 CD7P09564 240 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 CXCL2P19875 107 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 ATP6V0CP27449 155 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 RAB2AP61019 212 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 ZNF345Q14585 488 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 ODF3L2Q3SX64 289 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 MORN5Q5VZ52 161 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 SPATA31B1PQ5VZV4 182 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 CST9LP1Q5W188 147 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 FAM122CQ6P4D5 195 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 PATE2Q6UY27 113 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 KCNRGQ8N5I3 272 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
VPS4B-205ENST00000591383 PARD6GQ9BYG4 376 aaPredicted RBP4.78□□□□□ -1.64
VPS4B-205ENST00000591383 NRN1Q9NPD7 142 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 RFNGQ9Y644 331 aa4.78□□□□□ -1.64
VPS4B-205ENST00000591383 TRAV5A0A0B4J249 113 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 A0A0D9SG52 128 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 HMSDA8MTL9 139 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 OR11H12B2RN74 326 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 H3BTX0 84 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TAAR5O14804 337 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 OR7C2O60412 319 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 SNRPCP09234 159 aaKnown RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 RPL7P18124 248 aaKnown RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 PLP1P60201 277 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 UBE2L3P68036 154 aaKnown RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 ACOT6Q3I5F7 207 aaPredicted RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 PSMG4Q5JS54 123 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 FAM78BQ5VT40 261 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TMUB2Q71RG4 321 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 MIR17HGQ75NE6 70 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 IQCF2Q8IXL9 164 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 FAM24BQ8N5W8 94 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 DEFB125Q8N687 156 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 LRRC20Q8TCA0 184 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TMEM37Q8WXS4 190 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 GNPNAT1Q96EK6 184 aaPredicted RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 GPR82Q96P67 336 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 MRPL32Q9BYC8 188 aaKnown RBP4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TUBA4BQ9H853 241 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 MAP6D1Q9H9H5 199 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 DNAJC4Q9NNZ3 241 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TIMM9Q9Y5J7 89 aa4.77□□□□□ -1.65
VPS4B-205ENST00000591383 TRAV2A0A0B4J234 112 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 K7EQG2 157 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 IGHV4-30-4P0DP06 118 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 PYYP10082 97 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms