RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 UNQ5815/PRO19632Q6UWF5 114 aa8.86□□□□□ -0.99
TPM4-213ENST00000591226 TOMM20LQ6UXN7 152 aa8.86□□□□□ -0.99
TPM4-213ENST00000591226 ZNF48Q96MX3 618 aaPredicted RBP8.86□□□□□ -0.99
TPM4-213ENST00000591226 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
TPM4-213ENST00000591226 THYN1Q9P016 225 aa8.86□□□□□ -0.99
TPM4-213ENST00000591226 CDC42EP3Q9UKI2 254 aa8.86□□□□□ -0.99
TPM4-213ENST00000591226 TRAV30A0A087WSZ9 112 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 LINC01548A6NM66 108 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 TYMSP04818 313 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 FOXL1Q12952 345 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 COA6Q5JTJ3 125 aaKnown RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 BCL6BQ8N143 479 aaPredicted RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 C5orf56Q8N8D9 126 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 FAM110DQ8TAY7 271 aaPredicted RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 SHANK2-AS3Q9BTD1 123 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 RNASE7Q9H1E1 156 aaKnown RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 SOX21Q9Y651 276 aaPredicted RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 WI2-2373I1.2A0A1W2PRP0 233 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 H3BRN7 92 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 ISLRO14498 428 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 RIPPLY3P57055 190 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
TPM4-213ENST00000591226 OCIAD2Q56VL3 154 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 PIFOQ8TCI5 191 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 Q9H3A6 140 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 C7orf69Q9H7B7 122 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 ZNF586Q9NXT0 402 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 IL36BQ9NZH7 164 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 TMEM14CQ9P0S9 112 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 EPDR1Q9UM22 224 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 V9GYV3 84 aa8.85□□□□□ -0.99
TPM4-213ENST00000591226 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
TPM4-213ENST00000591226 OR2T8A6NH00 312 aa8.84□□□□□ -0.99
TPM4-213ENST00000591226 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
TPM4-213ENST00000591226 PTPN13Q12923 2485 aa8.84□□□□□ -0.99
TPM4-213ENST00000591226 G3V318 75 aa8.84□□□□□ -0.99
TPM4-213ENST00000591226 CLEC3BP05452 202 aa8.83□□□□□ -1
TPM4-213ENST00000591226 HIST1H1EP10412 219 aaKnown RBP8.83□□□□□ -1
TPM4-213ENST00000591226 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
TPM4-213ENST00000591226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -1
TPM4-213ENST00000591226 SGK494Q96LW2 274 aa8.83□□□□□ -1
TPM4-213ENST00000591226 MS4A10Q96PG2 267 aa8.83□□□□□ -1
TPM4-213ENST00000591226 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
TPM4-213ENST00000591226 FCGR2BP31994 310 aaPredicted RBP8.83□□□□□ -1
TPM4-213ENST00000591226 DSCR9P59020 149 aa8.83□□□□□ -1
TPM4-213ENST00000591226 BAGE2Q86Y30 109 aa8.83□□□□□ -1
TPM4-213ENST00000591226 C5orf17Q8NAS9 161 aa8.83□□□□□ -1
TPM4-213ENST00000591226 CHRDL1Q9BU40 450 aa8.83□□□□□ -1
TPM4-213ENST00000591226 CST9LQ9H4G1 147 aa8.83□□□□□ -1
TPM4-213ENST00000591226 OSTCQ9NRP0 149 aa8.83□□□□□ -1
TPM4-213ENST00000591226 HIF1ANQ9NWT6 349 aa8.83□□□□□ -1
TPM4-213ENST00000591226 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
TPM4-213ENST00000591226 A0A1B0GUS0 222 aa8.82□□□□□ -1
TPM4-213ENST00000591226 AMY1AP04745 511 aa8.82□□□□□ -1
TPM4-213ENST00000591226 CTSGP08311 255 aa8.82□□□□□ -1
TPM4-213ENST00000591226 UBE2G1P62253 170 aa8.82□□□□□ -1
TPM4-213ENST00000591226 RHOGP84095 191 aa8.82□□□□□ -1
TPM4-213ENST00000591226 RPEL1Q2QD12 228 aa8.82□□□□□ -1
TPM4-213ENST00000591226 C15orf32Q32M92 178 aa8.82□□□□□ -1
TPM4-213ENST00000591226 ERASQ7Z444 233 aa8.82□□□□□ -1
TPM4-213ENST00000591226 BPIFA4PQ86YQ2 179 aa8.82□□□□□ -1
TPM4-213ENST00000591226 CCDC140Q96MF4 163 aa8.82□□□□□ -1
TPM4-213ENST00000591226 C1orf43Q9BWL3 253 aa8.82□□□□□ -1
TPM4-213ENST00000591226 MEGF9Q9H1U4 602 aa8.82□□□□□ -1
TPM4-213ENST00000591226 B4DSR2 109 aa8.82□□□□□ -1
TPM4-213ENST00000591226 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
TPM4-213ENST00000591226 TMEM183BQ1AE95 376 aa8.82□□□□□ -1
TPM4-213ENST00000591226 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
TPM4-213ENST00000591226 EXOC3-AS1Q8N2X6 119 aa8.82□□□□□ -1
TPM4-213ENST00000591226 BTF3L4Q96K17 158 aa8.82□□□□□ -1
TPM4-213ENST00000591226 C17orf77Q96MU5 243 aa8.82□□□□□ -1
TPM4-213ENST00000591226 OTORQ9NRC9 128 aa8.82□□□□□ -1
TPM4-213ENST00000591226 CLEC5AQ9NY25 188 aa8.82□□□□□ -1
TPM4-213ENST00000591226 AVPP01185 164 aa8.81□□□□□ -1
TPM4-213ENST00000591226 IGLC2P0DOY2 106 aa8.81□□□□□ -1
TPM4-213ENST00000591226 ADMP35318 185 aa8.81□□□□□ -1
TPM4-213ENST00000591226 PET117Q6UWS5 81 aa8.81□□□□□ -1
TPM4-213ENST00000591226 OR4F17Q8NGA8 305 aa8.81□□□□□ -1
TPM4-213ENST00000591226 VN1R17PQ8TDU5 208 aa8.81□□□□□ -1
TPM4-213ENST00000591226 KLF12Q9Y4X4 402 aa8.81□□□□□ -1
TPM4-213ENST00000591226 IGHV3-35A0A0C4DH35 117 aa8.81□□□□□ -1
TPM4-213ENST00000591226 MRPS12O15235 138 aaKnown RBP8.81□□□□□ -1
TPM4-213ENST00000591226 TCRAP04437 139 aa8.81□□□□□ -1
TPM4-213ENST00000591226 SLC25A16P16260 332 aa8.81□□□□□ -1
TPM4-213ENST00000591226 COL8A1P27658 744 aa8.81□□□□□ -1
TPM4-213ENST00000591226 GPR183P32249 361 aa8.81□□□□□ -1
TPM4-213ENST00000591226 LY6EQ16553 131 aa8.81□□□□□ -1
TPM4-213ENST00000591226 KLK9Q2XQG4 91 aa8.81□□□□□ -1
TPM4-213ENST00000591226 OR8I2Q8N0Y5 310 aa8.81□□□□□ -1
TPM4-213ENST00000591226 ZNF738Q8NE65 137 aa8.81□□□□□ -1
TPM4-213ENST00000591226 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
TPM4-213ENST00000591226 TXN2Q99757 166 aa8.81□□□□□ -1
TPM4-213ENST00000591226 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
TPM4-213ENST00000591226 COX11Q9Y6N1 276 aa8.81□□□□□ -1
TPM4-213ENST00000591226 ZANQ9Y493 2812 aa8.8□□□□□ -1
TPM4-213ENST00000591226 TRBV19A0A075B6N1 114 aa8.8□□□□□ -1
TPM4-213ENST00000591226 TRBV9A0A0B4J1U6 114 aa8.8□□□□□ -1
TPM4-213ENST00000591226 VAMP8Q9BV40 100 aa8.8□□□□□ -1
TPM4-213ENST00000591226 SERTAD4Q9NUC0 356 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms