RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 SSX7Q7RTT5 188 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 GTSCR1Q86UQ5 136 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 FXYD5Q96DB9 178 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 SAT2Q96F10 170 aaPredicted RBP8.99□□□□□ -0.97
APOC1-206ENST00000590334 PRR25Q96S07 402 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 PAXXQ9BUH6 204 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 C19orf73Q9NVV2 129 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 ZNF586Q9NXT0 402 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 NOTCH3Q9UM47 2321 aa8.99□□□□□ -0.97
APOC1-206ENST00000590334 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 OR7C2O60412 319 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 CXorf1O96002 111 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 FHITP49789 147 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 CD81P60033 236 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 ODF3L2Q3SX64 289 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 RNF141Q8WVD5 230 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 SLC50A1Q9BRV3 221 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 MAP6D1Q9H9H5 199 aa8.98□□□□□ -0.97
APOC1-206ENST00000590334 ZNF331Q9NQX6 463 aaPredicted RBP8.98□□□□□ -0.97
APOC1-206ENST00000590334 AURKAIP1Q9NWT8 199 aaPredicted RBP8.98□□□□□ -0.97
APOC1-206ENST00000590334 TRAV8-2A0A0B4J237 113 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 HMGB3O15347 200 aaKnown RBP8.97□□□□□ -0.97
APOC1-206ENST00000590334 EIF3GO75821 320 aaKnown RBP eCLIP8.97□□□□□ -0.97
APOC1-206ENST00000590334 NDUFB4O95168 129 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 NBEAP1P0C6P0 100 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 ARL14EPLP0DKL9 152 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 ID1P41134 155 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 SNRPD3P62318 126 aaKnown RBP8.97□□□□□ -0.97
APOC1-206ENST00000590334 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 C16orf92Q96LL3 132 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 CLEC5AQ9NY25 188 aa8.97□□□□□ -0.97
APOC1-206ENST00000590334 OR11H12B2RN74 326 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 SLC17A3O00476 420 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 OR10J4P0C629 311 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 ZNF688P0C7X2 276 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 GCHFRP30047 84 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 UBE2L3P68036 154 aaKnown RBP8.96□□□□□ -0.98
APOC1-206ENST00000590334 ALKAL2Q6UX46 152 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 LYPD1Q8N2G4 141 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 FAM213BQ8TBF2 198 aa8.96□□□□□ -0.98
APOC1-206ENST00000590334 MAP1LC3B2A6NCE7 125 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 A8MZ25 164 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 H3BTX0 84 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 SNRPCP09234 159 aaKnown RBP8.95□□□□□ -0.98
APOC1-206ENST00000590334 DEFB131AP59861 70 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 PSG9Q00887 426 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 TEX261Q6UWH6 196 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 LRRC20Q8TCA0 184 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 BLNKQ8WV28 456 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 MAP1LC3BQ9GZQ8 125 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 UBQLN2Q9UHD9 624 aa8.95□□□□□ -0.98
APOC1-206ENST00000590334 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 K7EIL1 84 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 H2AFB1P0C5Y9 115 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 PSG3Q16557 428 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 PSMG4Q5JS54 123 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 FAM74A1Q5RGS3 127 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 MRPL53Q96EL3 112 aaKnown RBP8.94□□□□□ -0.98
APOC1-206ENST00000590334 WFDC10AQ9H1F0 79 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 PRELID1Q9Y255 219 aa8.94□□□□□ -0.98
APOC1-206ENST00000590334 PRB2P02812 416 aaPredicted RBP8.93□□□□□ -0.98
APOC1-206ENST00000590334 HLA-DMBP28068 263 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 FGF8P55075 233 aaPredicted RBP8.93□□□□□ -0.98
APOC1-206ENST00000590334 IGFL4Q6B9Z1 124 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 APRG1Q8IVJ8 170 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 DEFB125Q8N687 156 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 SFT2D1Q8WV19 159 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 LINC00052Q96N35 136 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
APOC1-206ENST00000590334 ZNF705EA8MWA4 302 aaPredicted RBP8.92□□□□□ -0.98
APOC1-206ENST00000590334 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 RANP62826 216 aaKnown RBP8.92□□□□□ -0.98
APOC1-206ENST00000590334 ZNF124Q15973 351 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 LINC00322Q6ZN03 302 aaPredicted RBP8.92□□□□□ -0.98
APOC1-206ENST00000590334 EXOC3-AS1Q8N2X6 119 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 ARL6IP6Q8N6S5 226 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 Q9H3A6 140 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 TMPRSS5Q9H3S3 457 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 SAV1Q9H4B6 383 aaPredicted RBP8.92□□□□□ -0.98
APOC1-206ENST00000590334 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
APOC1-206ENST00000590334 A0A0J9YX75 114 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 A0A1W2PRE2 83 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 A8MTW9 85 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 IFNA7P01567 189 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 HBE1P02100 147 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 BLOC1S1P78537 153 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 DEFA6Q01524 100 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 PMS2P11Q13670 270 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 ICAM4Q14773 271 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 FOXI2Q6ZQN5 318 aa8.91□□□□□ -0.98
APOC1-206ENST00000590334 ZNF738Q8NE65 137 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms