RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	FAM78B	Q5VT40	261 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	C10orf113	Q5VZT2	155 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	THAP6	Q8TBB0	222 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	NPCDR1	Q9BY65	106 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	SLC35B3	Q9H1N7	401 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	MBD2	Q9UBB5	411 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	HYDIN	Q4G0P3	5121 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	IGHV4-28	A0A0C4DH34	117 aa		12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	SLC17A3	O00476	420 aa		12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF705D	P0CH99	300 aa	Predicted RBP	12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF705B	P0CI00	300 aa	Predicted RBP	12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	SPATA31B1P	Q5VZV4	182 aa		12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	RPRM	Q9NS64	109 aa		12.51	□□□□□ -0.41
MBD1-221	ENST00000589867	HSPB11	Q9Y547	144 aa		12.51	□□□□□ -0.41
MBD1-221	ENST00000589867		H3BTX0	84 aa		12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	MPDU1	O75352	247 aa		12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.5	□□□□□ -0.41
MBD1-221	ENST00000589867		Q6ZRG5	221 aa		12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	OR4B1	Q8NGF8	309 aa		12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	SAT2	Q96F10	170 aa	Predicted RBP	12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	WDR61	Q9GZS3	305 aa	Known RBP	12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	WFDC1	Q9HC57	220 aa		12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF331	Q9NQX6	463 aa	Predicted RBP	12.5	□□□□□ -0.41
MBD1-221	ENST00000589867	PSG9	Q00887	426 aa		12.49	□□□□□ -0.41
MBD1-221	ENST00000589867	PMS2P11	Q13670	270 aa		12.49	□□□□□ -0.41
MBD1-221	ENST00000589867		Q5BKY6	102 aa		12.49	□□□□□ -0.41
MBD1-221	ENST00000589867	EBLN2	Q6P2I7	272 aa		12.49	□□□□□ -0.41
MBD1-221	ENST00000589867	LCE6A	A0A183	80 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	RPL12	P30050	165 aa	Known RBP	12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	CNN1	P51911	297 aa	Known RBP	12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	NANOS2	P60321	138 aa	Known RBP	12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	NUTF2	P61970	127 aa	Known RBP	12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	PSG3	Q16557	428 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	S100A7A	Q86SG5	101 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	BPIFA4P	Q86YQ2	179 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	C1orf158	Q8N1D5	194 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	OR1L4	Q8NGR5	311 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	FAM167A-AS1	Q96KT0	104 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	HRH4	Q9H3N8	390 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF586	Q9NXT0	402 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	RFNG	Q9Y644	331 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	VPS13D	Q5THJ4	4388 aa		12.48	□□□□□ -0.41
MBD1-221	ENST00000589867	KMT2A	Q03164	3969 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	CRX	O43186	299 aa	Predicted RBP	12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	MIF	P14174	115 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	CXCL2	P19875	107 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	OXA1L	Q15070	435 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	PFDN5	Q99471	154 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	ATP5S	Q99766	215 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	C1QTNF4	Q9BXJ3	329 aa		12.47	□□□□□ -0.41
MBD1-221	ENST00000589867	PRAC2	D3DTV9	90 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	PET100	P0DJ07	73 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	LCN15	Q6UWW0	184 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	ZNF738	Q8NE65	137 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	OR8A1	Q8NGG7	326 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	SMIM3	Q9BZL3	60 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	MFF	Q9GZY8	342 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	MED28	Q9H204	178 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	RNF24	Q9Y225	148 aa		12.46	□□□□□ -0.41
MBD1-221	ENST00000589867	CXorf65	A6NEN9	183 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	NDUFB4	O95168	129 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	MIR17HG	Q75NE6	70 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	RPUSD4	Q96CM3	377 aa	Known RBP	12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	NEU1	Q99519	415 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	SLC25A2	Q9BXI2	301 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	TMEM14C	Q9P0S9	112 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867	CELA1	Q9UNI1	258 aa		12.45	□□□□□ -0.42
MBD1-221	ENST00000589867		M0R2Z0	102 aa		12.44	□□□□□ -0.42
MBD1-221	ENST00000589867	PYY	P10082	97 aa		12.44	□□□□□ -0.42
MBD1-221	ENST00000589867	C11orf45	Q8TAV5	145 aa		12.44	□□□□□ -0.42
MBD1-221	ENST00000589867	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.44	□□□□□ -0.42
MBD1-221	ENST00000589867	SLC50A1	Q9BRV3	221 aa		12.44	□□□□□ -0.42
MBD1-221	ENST00000589867		G3V3Q6	166 aa		12.43	□□□□□ -0.42
MBD1-221	ENST00000589867	DUSP14	O95147	198 aa	Known RBP	12.43	□□□□□ -0.42
MBD1-221	ENST00000589867	SPINK13	Q1W4C9	94 aa		12.43	□□□□□ -0.42
MBD1-221	ENST00000589867	RGS21	Q2M5E4	152 aa		12.43	□□□□□ -0.42
MBD1-221	ENST00000589867	ZNF503	Q96F45	646 aa		12.43	□□□□□ -0.42
MBD1-221	ENST00000589867	TRBV19	A0A075B6N1	114 aa		12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	PRM2	P04554	102 aa		12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	HIST1H1A	Q02539	215 aa	Predicted RBP	12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	LRRC20	Q8TCA0	184 aa		12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	IGF2BP2-AS1	Q96M15	143 aa		12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.42	□□□□□ -0.42
MBD1-221	ENST00000589867	NUPR2	A6NF83	97 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	ZNF253	O75346	499 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	GIP	P09681	153 aa	Predicted RBP	12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	HIST1H1E	P10412	219 aa	Known RBP	12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	KIR3DS1	Q14943	382 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	GUK1	Q16774	197 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	BAP18	Q8IXM2	172 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	AQP10	Q96PS8	301 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	DNAH6	Q9C0G6	4158 aa		12.41	□□□□□ -0.42
MBD1-221	ENST00000589867	IGHV3OR16-12	A0A075B7B8	117 aa		12.4	□□□□□ -0.42
MBD1-221	ENST00000589867	BOLA2-SMG1P6	H3BVE0	249 aa		12.4	□□□□□ -0.42
MBD1-221	ENST00000589867		M0R3E3	92 aa		12.4	□□□□□ -0.42
MBD1-221	ENST00000589867	C12orf74	Q32Q52	190 aa		12.4	□□□□□ -0.42
MBD1-221	ENST00000589867	FXYD5	Q96DB9	178 aa		12.4	□□□□□ -0.42
MBD1-221	ENST00000589867	TRAV12-2	A0A075B6T6	113 aa		12.39	□□□□□ -0.43

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