RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 LINC01587Q99440 93 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 IGHV1-46P01743 117 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 RASL10AQ92737 203 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 PIMREGQ9BSJ6 248 aa11.86□□□□□ -0.51
SMARCA4-214ENST00000589677 C9orf139Q6ZV77 190 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 TIMM21Q9BVV7 248 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 SIGLEC8Q9NYZ4 499 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 K7EN84 100 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 GAGE2AQ6NT46 116 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 SRSF8Q9BRL6 282 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 TDRD6O60522 2096 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 FDCSPQ8NFU4 85 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 TMEM141Q96I45 108 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 PINLYPA6NC86 204 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 FCN3O75636 299 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 NPC2P61916 151 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 C12orf74Q32Q52 190 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 COLCA1Q6ZS62 124 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 PLA2G2EQ9NZK7 142 aa11.85□□□□□ -0.51
SMARCA4-214ENST00000589677 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 SLC25A16P16260 332 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 ETV2O00321 342 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 PAX8Q06710 450 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 LMO1P25800 156 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 RALGAPA1Q6GYQ0 2036 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 C14orf178Q8N769 122 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
SMARCA4-214ENST00000589677 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 IGHV1-8P0DP01 117 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 CD24P25063 80 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 UTF1Q5T230 341 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 SBF1O95248 1867 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 NUPR1O60356 82 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 LINC00158P58513 81 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 TCF15Q12870 199 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 TDRG1Q3Y452 100 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 LY6G5BQ8NDX9 201 aa11.83□□□□□ -0.52
SMARCA4-214ENST00000589677 TPRP12270 2363 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 PTPRDP23468 1912 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 K7ERJ3 54 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 UCNP55089 124 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 C17orf82Q86X59 251 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 TEX48A0A1B0GUV7 120 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 LEPROTO15243 131 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 ZNF474Q6S9Z5 364 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 GATD1Q8NB37 220 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 IGKV1D-17A0A075B6S4 117 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 B5MCH6 92 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 C9orf172C9J069 976 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 LRRK1Q38SD2 2015 aa11.82□□□□□ -0.52
SMARCA4-214ENST00000589677 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 CFHR1Q03591 330 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 TRACP01848 142 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 SAP30O75446 220 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 NDUFA4L2Q9NRX3 87 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 ADARB2-AS1A8MUL3 147 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 NDUFS7O75251 213 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 PMVKQ15126 192 aa11.81□□□□□ -0.52
SMARCA4-214ENST00000589677 TRBV19A0A075B6N1 114 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 FGF6P10767 208 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 AMTNQ6UX39 209 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 F8VRH5 84 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 WNT2P09544 360 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 B3GALT5-AS1P59052 145 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 PHLDA1Q8WV24 401 aaPredicted RBP11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 SCRT2Q9NQ03 307 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 DOCK6Q96HP0 2047 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 IGHV3-11P01762 117 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 IGKV1-16P04430 117 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 IGLV3-1P01715 115 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
SMARCA4-214ENST00000589677 ZSWIM8A7E2V4 1837 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR20EP86478 221 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR20CP86479 221 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR20DP86480 221 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR20BP86481 221 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 PRR20AP86496 221 aa11.79□□□□□ -0.52
SMARCA4-214ENST00000589677 ITLN2Q8WWU7 325 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms