RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 DNAJC4Q9NNZ3 241 aa6.4□□□□□ -1.38
SDF2-207ENST00000588472 LYRM2Q9NU23 88 aaPredicted RBP6.4□□□□□ -1.38
SDF2-207ENST00000588472 TRAV5A0A0B4J249 113 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 IGLL5B9A064 214 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 PRAF2O60831 178 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 CNN1P51911 297 aaKnown RBP6.39□□□□□ -1.39
SDF2-207ENST00000588472 HBG1P69891 147 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 HBG2P69892 147 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 HIST1H1AQ02539 215 aaPredicted RBP6.39□□□□□ -1.39
SDF2-207ENST00000588472 NHLH2Q02577 135 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 IL15RAQ13261 267 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 MORN5Q5VZ52 161 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 SPATA31B1PQ5VZV4 182 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 TMEM37Q8WXS4 190 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 MARVELD1Q9BSK0 173 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 TMEM208Q9BTX3 173 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 PPP1R14DQ9NXH3 145 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 OR5AC2Q9NZP5 309 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 CELA1Q9UNI1 258 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 WDR83OSQ9Y284 106 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
SDF2-207ENST00000588472 ZNF705FA8MVS1 300 aaPredicted RBP6.38□□□□□ -1.39
SDF2-207ENST00000588472 M0R2Z0 102 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 DUSP14O95147 198 aaKnown RBP6.38□□□□□ -1.39
SDF2-207ENST00000588472 CLINT1Q14677 625 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 OPCMLQ14982 345 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 Q6ZTC4 211 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 BPIFA4PQ86YQ2 179 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 OR1L4Q8NGR5 311 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 THAP6Q8TBB0 222 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 C2CD4CQ8TF44 421 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 LINC00476Q8WZB0 136 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 NMES1Q9C002 83 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 SLC25A31Q9H0C2 315 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 SLC39A9Q9NUM3 307 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 RNF24Q9Y225 148 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 PXMP4Q9Y6I8 212 aa6.38□□□□□ -1.39
SDF2-207ENST00000588472 TRAV12-2A0A075B6T6 113 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 A0A087X0K7 114 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 E5RGE8 158 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 H0YIZ8 118 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRM2P04554 102 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 CXCL3P19876 107 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 H2BFSP57053 126 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 B2MP61769 119 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRR20EP86478 221 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRR20CP86479 221 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRR20DP86480 221 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRR20BP86481 221 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PRR20AP86496 221 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PSG3Q16557 428 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 ATP6V1FQ16864 119 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 VWC2Q2TAL6 325 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 ZNF705AQ6ZN79 300 aaPredicted RBP6.37□□□□□ -1.39
SDF2-207ENST00000588472 AKAP14Q86UN6 197 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 OR11H7Q8NGC8 314 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 PPP1R1CQ8WVI7 109 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 RPUSD4Q96CM3 377 aaKnown RBP6.37□□□□□ -1.39
SDF2-207ENST00000588472 PFDN5Q99471 154 aa6.37□□□□□ -1.39
SDF2-207ENST00000588472 ZNF705GA8MUZ8 300 aaPredicted RBP6.36□□□□□ -1.39
SDF2-207ENST00000588472 H3BQ15 152 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 SLC17A3O00476 420 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 MRPS12O15235 138 aaKnown RBP6.36□□□□□ -1.39
SDF2-207ENST00000588472 HBE1P02100 147 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 HTN1P15515 57 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 HTN3P15516 51 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 RPL29P47914 159 aaKnown RBP6.36□□□□□ -1.39
SDF2-207ENST00000588472 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
SDF2-207ENST00000588472 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 GCSAMLQ5JQS6 135 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 LCN15Q6UWW0 184 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 AMTNQ6UX39 209 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 BAP18Q8IXM2 172 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 C1orf158Q8N1D5 194 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 OR8A1Q8NGG7 326 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 IGF2BP2-AS1Q96M15 143 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 CLUHP3Q96NS8 147 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 SMIM3Q9BZL3 60 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 HRH4Q9H3N8 390 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 RFNGQ9Y644 331 aa6.36□□□□□ -1.39
SDF2-207ENST00000588472 VPS13DQ5THJ4 4388 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 DEFB131BA0A096LNP1 70 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 LOC102723971A0A1B0GUV8 181 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 SMIM9A6NGZ8 99 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 C11orf94C9JXX5 98 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 PRAC2D3DTV9 90 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 BOLA2-SMG1P6H3BVE0 249 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 J3KRW8 73 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 INSP01308 110 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 SPART-AS1P0CW21 52 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 RRN3P1Q2M238 152 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 BLNKQ8WV28 456 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 SLC50A1Q9BRV3 221 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 RNF126Q9BV68 326 aa6.35□□□□□ -1.39
SDF2-207ENST00000588472 NPCDR1Q9BY65 106 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms