RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 HRH4Q9H3N8 390 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 ZNF331Q9NQX6 463 aaPredicted RBP11.67□□□□□ -0.54
RETREG3-206ENST00000588423 KMT2CQ8NEZ4 4911 aaKnown RBP11.67□□□□□ -0.54
RETREG3-206ENST00000588423 C17orf112F2Z3M2 114 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 F6UB75 175 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
RETREG3-206ENST00000588423 IGLC2P0DOY2 106 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 PSG9Q00887 426 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 GUK1Q16774 197 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 Q8NAQ8 132 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 PARD6GQ9BYG4 376 aaPredicted RBP11.66□□□□□ -0.54
RETREG3-206ENST00000588423 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
RETREG3-206ENST00000588423 STARD9Q9P2P6 4700 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 PSG3Q16557 428 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 X6R8D5 127 aa11.65□□□□□ -0.54
RETREG3-206ENST00000588423 AGRNO00468 2067 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 hCG_2014768A0A024R1R8 64 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF253O75346 499 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 IFNA5P01569 189 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF705AQ6ZN79 300 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-206ENST00000588423 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-206ENST00000588423 NEU1Q99519 415 aa11.64□□□□□ -0.55
RETREG3-206ENST00000588423 IGHV4-28A0A0C4DH34 117 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 H3BQ15 152 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 AMBPP02760 352 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
RETREG3-206ENST00000588423 OR8A1Q8NGG7 326 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 SCGB1C1Q8TD33 95 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
RETREG3-206ENST00000588423 NUPR2A6NF83 97 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF705FA8MVS1 300 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-206ENST00000588423 SLC17A3O00476 420 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF705DP0CH99 300 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF705BP0CI00 300 aaPredicted RBP11.62□□□□□ -0.55
RETREG3-206ENST00000588423 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 C11orf45Q8TAV5 145 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 ST6GAL2Q96JF0 529 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 AQP10Q96PS8 301 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 MRPL32Q9BYC8 188 aaKnown RBP11.62□□□□□ -0.55
RETREG3-206ENST00000588423 SMIM3Q9BZL3 60 aa11.62□□□□□ -0.55
RETREG3-206ENST00000588423 TRBV19A0A075B6N1 114 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 SMIM9A6NGZ8 99 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 RBMY1A1P0DJD3 496 aaKnown RBP11.61□□□□□ -0.55
RETREG3-206ENST00000588423 RBMY1CP0DJD4 496 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
RETREG3-206ENST00000588423 FXYD7P58549 80 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 PDE6HQ13956 83 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
RETREG3-206ENST00000588423 OR2T35Q8NGX2 323 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF586Q9NXT0 402 aa11.61□□□□□ -0.55
RETREG3-206ENST00000588423 G3V3Q6 166 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 DEFB4AO15263 64 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
RETREG3-206ENST00000588423 HIST1H1AQ02539 215 aaPredicted RBP11.6□□□□□ -0.55
RETREG3-206ENST00000588423 Q5BKY6 102 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 SLC25A2Q9BXI2 301 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 WFDC1Q9HC57 220 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 GOLT1BQ9Y3E0 138 aa11.6□□□□□ -0.55
RETREG3-206ENST00000588423 H3BTX0 84 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 PMS2P11Q13670 270 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 ZNF266Q14584 549 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 CEMP1Q6PRD7 247 aaPredicted RBP11.59□□□□□ -0.55
RETREG3-206ENST00000588423 MIR17HGQ75NE6 70 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 MRPL53Q96EL3 112 aaKnown RBP11.59□□□□□ -0.55
RETREG3-206ENST00000588423 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 TIMM9Q9Y5J7 89 aa11.59□□□□□ -0.55
RETREG3-206ENST00000588423 TMEM189A5PLL7 270 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 BOLA2-SMG1P6H3BVE0 249 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 PYYP10082 97 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 AKAP14Q86UN6 197 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-206ENST00000588423 OR51M1Q9H341 326 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
RETREG3-206ENST00000588423 LCE6AA0A183 80 aa11.57□□□□□ -0.56
RETREG3-206ENST00000588423 CRXO43186 299 aaPredicted RBP11.57□□□□□ -0.56
RETREG3-206ENST00000588423 NDUFB4O95168 129 aa11.57□□□□□ -0.56
RETREG3-206ENST00000588423 INSP01308 110 aa11.57□□□□□ -0.56
RETREG3-206ENST00000588423 NANOS2P60321 138 aaKnown RBP11.57□□□□□ -0.56
RETREG3-206ENST00000588423 RHOBP62745 196 aa11.57□□□□□ -0.56
RETREG3-206ENST00000588423 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms