RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RLN2P04090 185 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 DEFA1P59665 94 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 DEFA3P59666 94 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 IFITM3Q01628 133 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 BAXQ07812 192 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 BPIFA4PQ86YQ2 179 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 PPP1R14DQ9NXH3 145 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 UBE2L5PA0A1B0GUS4 154 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 SPART-AS1P0CW21 52 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 CXCL2P19875 107 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 CXCL3P19876 107 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 PSG3Q16557 428 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 ATP6V1FQ16864 119 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 VWC2Q2TAL6 325 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 C12orf74Q32Q52 190 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 MIC13Q5XKP0 118 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 LCN15Q6UWW0 184 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 ZNF767PQ75MW2 155 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 OR11H7Q8NGC8 314 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 OR1L4Q8NGR5 311 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 TMEM37Q8WXS4 190 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 IGF2BP2-AS1Q96M15 143 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 DNAJC4Q9NNZ3 241 aa14.06□□□□□ -0.16
TPM4-208ENST00000588410 A8MTW9 85 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 SIX6O95475 246 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 RHOBP62745 196 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 HIST1H1AQ02539 215 aaPredicted RBP14.05□□□□□ -0.16
TPM4-208ENST00000588410 AMTNQ6UX39 209 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 C1orf158Q8N1D5 194 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 BATF3Q9NR55 127 aa14.05□□□□□ -0.16
TPM4-208ENST00000588410 DEFB131BA0A096LNP1 70 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 TEX48A0A1B0GUV7 120 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 MRPS12O15235 138 aaKnown RBP14.04□□□□□ -0.16
TPM4-208ENST00000588410 INSP01308 110 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 SNRPCP09234 159 aaKnown RBP14.04□□□□□ -0.16
TPM4-208ENST00000588410 FGF7P21781 194 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PRR20EP86478 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PRR20CP86479 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PRR20DP86480 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PRR20BP86481 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PRR20AP86496 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 CYCSP99999 105 aaKnown RBP14.04□□□□□ -0.16
TPM4-208ENST00000588410 OPCMLQ14982 345 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 SPINK13Q1W4C9 94 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 RRN3P1Q2M238 152 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 OR8A1Q8NGG7 326 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 PFDN5Q99471 154 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 SLC50A1Q9BRV3 221 aa14.04□□□□□ -0.16
TPM4-208ENST00000588410 LOC102723971A0A1B0GUV8 181 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 E5RGE8 158 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 M0R2Z0 102 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 RPL29P47914 159 aaKnown RBP14.03□□□□□ -0.16
TPM4-208ENST00000588410 B2MP61769 119 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 LRRC37A5PQ49AS3 106 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 RPUSD4Q96CM3 377 aaKnown RBP14.03□□□□□ -0.16
TPM4-208ENST00000588410 NMES1Q9C002 83 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 SLC25A31Q9H0C2 315 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 SLC39A9Q9NUM3 307 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 APLNQ9ULZ1 77 aa14.03□□□□□ -0.16
TPM4-208ENST00000588410 IGHV4-4A0A075B6R2 117 aa14.02□□□□□ -0.17
TPM4-208ENST00000588410 BOLA2-SMG1P6H3BVE0 249 aa14.02□□□□□ -0.17
TPM4-208ENST00000588410 MORN5Q5VZ52 161 aa14.02□□□□□ -0.17
TPM4-208ENST00000588410 RNF126Q9BV68 326 aa14.02□□□□□ -0.17
TPM4-208ENST00000588410 ZNF331Q9NQX6 463 aaPredicted RBP14.02□□□□□ -0.17
TPM4-208ENST00000588410 H3BTX0 84 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 SSNA1O43805 119 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 MPDU1O75352 247 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 CHAC2Q8WUX2 184 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 MARVELD1Q9BSK0 173 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 PXMP4Q9Y6I8 212 aa14.01□□□□□ -0.17
TPM4-208ENST00000588410 TRAV5A0A0B4J249 113 aa14□□□□□ -0.17
TPM4-208ENST00000588410 NHLH2Q02577 135 aa14□□□□□ -0.17
TPM4-208ENST00000588410 GUK1Q16774 197 aa14□□□□□ -0.17
TPM4-208ENST00000588410 BAP18Q8IXM2 172 aa14□□□□□ -0.17
TPM4-208ENST00000588410 RPP25LQ8N5L8 163 aaKnown RBP14□□□□□ -0.17
TPM4-208ENST00000588410 OR5AC2Q9NZP5 309 aa14□□□□□ -0.17
TPM4-208ENST00000588410 DKK2Q9UBU2 259 aa14□□□□□ -0.17
TPM4-208ENST00000588410 YTHDF2Q9Y5A9 579 aaKnown RBP14□□□□□ -0.17
TPM4-208ENST00000588410 TRAV12-2A0A075B6T6 113 aa13.99□□□□□ -0.17
TPM4-208ENST00000588410 IGLC2P0DOY2 106 aa13.99□□□□□ -0.17
TPM4-208ENST00000588410 PRB4P10163 310 aaPredicted RBP13.99□□□□□ -0.17
TPM4-208ENST00000588410 OR5C1Q8NGR4 320 aa13.99□□□□□ -0.17
TPM4-208ENST00000588410 OR10J6PQ8NGY7 276 aa13.99□□□□□ -0.17
TPM4-208ENST00000588410 NIPSNAP3BQ9BS92 247 aa13.99□□□□□ -0.17
TPM4-208ENST00000588410 H3BQ15 152 aa13.98□□□□□ -0.17
TPM4-208ENST00000588410 SLC17A3O00476 420 aa13.98□□□□□ -0.17
TPM4-208ENST00000588410 CRXO43186 299 aaPredicted RBP13.98□□□□□ -0.17
TPM4-208ENST00000588410 THAP6Q8TBB0 222 aa13.98□□□□□ -0.17
TPM4-208ENST00000588410 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
TPM4-208ENST00000588410 ZNF705GA8MUZ8 300 aaPredicted RBP13.97□□□□□ -0.17
TPM4-208ENST00000588410 CLINT1Q14677 625 aa13.97□□□□□ -0.17
TPM4-208ENST00000588410 LINC01587Q99440 93 aa13.97□□□□□ -0.17
TPM4-208ENST00000588410 NDUFAF3Q9BU61 184 aa13.97□□□□□ -0.17
TPM4-208ENST00000588410 H0YIZ8 118 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 PET100P0DJ07 73 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 H2BFSP57053 126 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 TMEM256Q8N2U0 113 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 PPP1R1CQ8WVI7 109 aa13.96□□□□□ -0.17
TPM4-208ENST00000588410 SAT2Q96F10 170 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms