RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ZNF586Q9NXT0 402 aa11.3□□□□□ -0.6
NFIX-208ENST00000587260 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
NFIX-208ENST00000587260 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 PAGE4O60829 102 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 MEOX2P50222 304 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 PDE6HQ13956 83 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 HAGHQ16775 308 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 RARRES2Q99969 163 aa11.29□□□□□ -0.6
NFIX-208ENST00000587260 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
NFIX-208ENST00000587260 TRRAPQ9Y4A5 3859 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 ZNF253O75346 499 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 SRSF3P84103 164 aaKnown RBP11.28□□□□□ -0.6
NFIX-208ENST00000587260 ICAM4Q14773 271 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 PEA15Q15121 130 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 EIF5A2Q9GZV4 153 aaKnown RBP11.28□□□□□ -0.6
NFIX-208ENST00000587260 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 MLXQ9UH92 298 aa11.28□□□□□ -0.6
NFIX-208ENST00000587260 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
NFIX-208ENST00000587260 HELTA6NFD8 242 aa11.27□□□□□ -0.61
NFIX-208ENST00000587260 NDUFB4O95168 129 aa11.27□□□□□ -0.61
NFIX-208ENST00000587260 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
NFIX-208ENST00000587260 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
NFIX-208ENST00000587260 CCDC28AQ8IWP9 274 aa11.27□□□□□ -0.61
NFIX-208ENST00000587260 ATF4P18848 351 aaPredicted RBP11.26□□□□□ -0.61
NFIX-208ENST00000587260 CD81P60033 236 aa11.26□□□□□ -0.61
NFIX-208ENST00000587260 UBE2G2P60604 165 aa11.26□□□□□ -0.61
NFIX-208ENST00000587260 BLNKQ8WV28 456 aa11.26□□□□□ -0.61
NFIX-208ENST00000587260 IGKV3-7A0A075B6H7 116 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 ZNF785A8K8V0 405 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 IGLL1P15814 213 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 TCEAL7Q9BRU2 100 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 C9JQL5 133 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
NFIX-208ENST00000587260 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
NFIX-208ENST00000587260 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
NFIX-208ENST00000587260 PSG9Q00887 426 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 TCF24Q7RTU0 167 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
NFIX-208ENST00000587260 H3BTX0 84 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 PDE6DO43924 150 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 SRP19P09132 144 aaKnown RBP11.24□□□□□ -0.61
NFIX-208ENST00000587260 ATP5G3P48201 142 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
NFIX-208ENST00000587260 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
NFIX-208ENST00000587260 C9orf66Q5T8R8 295 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 CITED4Q96RK1 184 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 Q9H3A6 140 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
NFIX-208ENST00000587260 ZNF331Q9NQX6 463 aaPredicted RBP11.24□□□□□ -0.61
NFIX-208ENST00000587260 F6UZH7 168 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 TMEM250H0YL14 139 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 SLC17A3O00476 420 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 DEFB114Q30KQ6 69 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 TMEM61Q8N0U2 210 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
NFIX-208ENST00000587260 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
NFIX-208ENST00000587260 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
NFIX-208ENST00000587260 PGPA6NDG6 321 aa11.22□□□□□ -0.61
NFIX-208ENST00000587260 SOCS3O14543 225 aa11.22□□□□□ -0.61
NFIX-208ENST00000587260 GBGT1Q8N5D6 347 aa11.22□□□□□ -0.61
NFIX-208ENST00000587260 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
NFIX-208ENST00000587260 TMEM218A2RU14 115 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 IGLV1-51P01701 117 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 TFPI2P48307 235 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 RBPMS2Q6ZRY4 209 aaKnown RBP11.21□□□□□ -0.61
NFIX-208ENST00000587260 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 AAMDCQ9H7C9 122 aa11.21□□□□□ -0.61
NFIX-208ENST00000587260 TRAV2A0A0B4J234 112 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 HIST1H2BAQ96A08 127 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 MRPL53Q96EL3 112 aaKnown RBP11.2□□□□□ -0.62
NFIX-208ENST00000587260 EPDR1Q9UM22 224 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 PRELID1Q9Y255 219 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 PKD1L1Q8TDX9 2849 aa11.2□□□□□ -0.62
NFIX-208ENST00000587260 ISLRO14498 428 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 TSPAN4O14817 238 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 INSL3P51460 131 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 GUCA2BQ16661 112 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms