RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 HIST1H2BAQ96A08 127 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 C11orf68Q9H3H3 251 aaKnown RBP7.81□□□□□ -1.16
ZNF540-205ENST00000587220 RBKSQ9H477 322 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 HSPB7Q9UBY9 170 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 C5orf52A6NGY3 159 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 DEFB4AO15263 64 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 TOMM40O96008 361 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 MEOX2P50222 304 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 PPT1P50897 306 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 TAS2R30P59541 319 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 SNRPD3P62318 126 aaKnown RBP7.8□□□□□ -1.16
ZNF540-205ENST00000587220 VAMP2P63027 116 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 PLECQ15149 4684 aaKnown RBP7.8□□□□□ -1.16
ZNF540-205ENST00000587220 USF2Q15853 346 aaPredicted RBP7.8□□□□□ -1.16
ZNF540-205ENST00000587220 PSMG4Q5JS54 123 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 RAB40CQ96S21 281 aa7.8□□□□□ -1.16
ZNF540-205ENST00000587220 C7orf77A4D0Y5 90 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 ZFP92A6NM28 416 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 KNCNA6PVL3 124 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 B4DEV8 164 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 C9JQL5 133 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 FABP1P07148 127 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 ATP5IP56385 69 aaPredicted RBP7.79□□□□□ -1.16
ZNF540-205ENST00000587220 NANOS2P60321 138 aaKnown RBP7.79□□□□□ -1.16
ZNF540-205ENST00000587220 C16orf54Q6UWD8 224 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
ZNF540-205ENST00000587220 TMEM252Q8N6L7 170 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 OR51G1Q8NGK1 321 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 DCANP1Q8TF63 244 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 TMEM170AQ8WVE7 144 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 GLMPQ8WWB7 406 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 SLC35E1Q96K37 410 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 C12orf57Q99622 126 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 ATP5SQ99766 215 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 EIF5A2Q9GZV4 153 aaKnown RBP7.79□□□□□ -1.16
ZNF540-205ENST00000587220 NRN1Q9NPD7 142 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 RPS10P5Q9NQ39 176 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 U3KQE9 123 aa7.79□□□□□ -1.16
ZNF540-205ENST00000587220 IGSF23A1L1A6 192 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 RBFOX3A6NFN3 312 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 FAM90A26D6RGX4 464 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 PSG1P11464 419 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 RAB5AP20339 215 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 B2MP61769 119 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 NUTF2P61970 127 aaKnown RBP7.78□□□□□ -1.16
ZNF540-205ENST00000587220 RAB11AP62491 216 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 NHLH2Q02577 135 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 KHDC3LQ587J8 217 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 SOHLH1Q5JUK2 328 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 STX12Q86Y82 276 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 OR2G3Q8NGZ4 309 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 RNF125Q96EQ8 232 aa7.78□□□□□ -1.16
ZNF540-205ENST00000587220 PSMG3Q9BT73 122 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-205ENST00000587220 WRBO00258 174 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 AGPAT2O15120 278 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 BUB3O43684 328 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 S100A9P06702 114 aaKnown RBP7.77□□□□□ -1.17
ZNF540-205ENST00000587220 S100A6P06703 90 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 MIFP14174 115 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 ATP6V0CP27449 155 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 GPX4P36969 197 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-205ENST00000587220 TAGLN2P37802 199 aaKnown RBP7.77□□□□□ -1.17
ZNF540-205ENST00000587220 SULT1A1P50225 295 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 AKR1D1P51857 326 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 PNRC1Q12796 327 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-205ENST00000587220 HSD17B11Q8NBQ5 300 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 FAM213BQ8TBF2 198 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 C2CD4CQ8TF44 421 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 YPEL4Q96NS1 127 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 CLEC5AQ9NY25 188 aa7.77□□□□□ -1.17
ZNF540-205ENST00000587220 IGHV4-28A0A0C4DH34 117 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 M0R036 132 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 IFNA5P01569 189 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 IAPPP10997 89 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 LYZP61626 148 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 RPP30P78346 268 aaKnown RBP7.76□□□□□ -1.17
ZNF540-205ENST00000587220 SERF2P84101 59 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 GAMTQ14353 236 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 AKR1C8PQ5T2L2 129 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 OR8G2PQ6IF36 304 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 TMEM182Q6ZP80 229 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-205ENST00000587220 Q8NAQ8 132 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 C1QTNF4Q9BXJ3 329 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 TMEM242Q9NWH2 141 aa7.76□□□□□ -1.17
ZNF540-205ENST00000587220 AGRNO00468 2067 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 FAM24AA6NFZ4 105 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 C11orf94C9JXX5 98 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 SSSCA1O60232 199 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 SRP19P09132 144 aaKnown RBP7.75□□□□□ -1.17
ZNF540-205ENST00000587220 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
ZNF540-205ENST00000587220 POLR2GP62487 172 aaKnown RBP eCLIP7.75□□□□□ -1.17
ZNF540-205ENST00000587220 ZNF90Q03938 601 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 DNLZQ5SXM8 178 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 LGALS9CQ6DKI2 356 aa7.75□□□□□ -1.17
ZNF540-205ENST00000587220 OR5C1Q8NGR4 320 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms