RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 ZNF124Q15973 351 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 SPATA31B1PQ5VZV4 182 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 SLC50A1Q9BRV3 221 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 SLC25A2Q9BXI2 301 aa12.74□□□□□ -0.37
DNMT1-212ENST00000587197 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 KANTRA0A1W2PQU2 76 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 BCL2L11O43521 198 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 ZNF253O75346 499 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-212ENST00000587197 LINC00052Q96N35 136 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 CLEC5AQ9NY25 188 aa12.73□□□□□ -0.37
DNMT1-212ENST00000587197 H3BQ15 152 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 UBE2CO00762 179 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 APOC4P55056 127 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 TAS2R45P59539 299 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 PDE6HQ13956 83 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 FOXI2Q6ZQN5 318 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 TMUB2Q71RG4 321 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 STHQ8IWL8 128 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 OR10G4Q8NGN3 311 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 OR10G9Q8NGN4 311 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 OR10G7Q8NGN6 311 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 SH3BGRL3Q9H299 93 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 OR51M1Q9H341 326 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 ZNF331Q9NQX6 463 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-212ENST00000587197 RPRMQ9NS64 109 aa12.72□□□□□ -0.37
DNMT1-212ENST00000587197 A0A1W2PPV4 95 aa12.71□□□□□ -0.37
DNMT1-212ENST00000587197 RAB2AP61019 212 aa12.71□□□□□ -0.37
DNMT1-212ENST00000587197 EIF5AP63241 154 aaKnown RBP12.71□□□□□ -0.37
DNMT1-212ENST00000587197 LGALSLQ3ZCW2 172 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-212ENST00000587197 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.37
DNMT1-212ENST00000587197 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
DNMT1-212ENST00000587197 CLUHP3Q96NS8 147 aa12.71□□□□□ -0.37
DNMT1-212ENST00000587197 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
DNMT1-212ENST00000587197 TRBV19A0A075B6N1 114 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 H3BMM0 161 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 SPP1P10451 314 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
DNMT1-212ENST00000587197 KHDC3LQ587J8 217 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 RPP25LQ8N5L8 163 aaKnown RBP12.7□□□□□ -0.38
DNMT1-212ENST00000587197 PAXXQ9BUH6 204 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
DNMT1-212ENST00000587197 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
DNMT1-212ENST00000587197 TENM3Q9P273 2699 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 PFDN1O60925 122 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 PYYP10082 97 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 PSG3Q16557 428 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 PQLC2Q6ZP29 291 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 RNF141Q8WVD5 230 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 FXYD5Q96DB9 178 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
DNMT1-212ENST00000587197 CSTL1Q9H114 145 aa12.69□□□□□ -0.38
DNMT1-212ENST00000587197 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
DNMT1-212ENST00000587197 SLC17A3O00476 420 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 OR7C2O60412 319 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 NBEAP1P0C6P0 100 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 CDC34P49427 236 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-212ENST00000587197 PSG9Q00887 426 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 CD300CQ08708 224 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 EBLN2Q6P2I7 272 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 MORN3Q6PF18 240 aaPredicted RBP12.68□□□□□ -0.38
DNMT1-212ENST00000587197 Q6ZWC4 215 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 STOML3Q8TAV4 291 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 ZNF503Q96F45 646 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 EDA2RQ9HAV5 297 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 NBEAL2Q6ZNJ1 2754 aa12.68□□□□□ -0.38
DNMT1-212ENST00000587197 A0A0J9YX75 114 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 A8MTW9 85 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 H3BTX0 84 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 NDUFB4O95168 129 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 SNRPCP09234 159 aaKnown RBP12.67□□□□□ -0.38
DNMT1-212ENST00000587197 SEC11BP0C7V7 166 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 ZFP69Q49AA0 526 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 AKR1C8PQ5T2L2 129 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
DNMT1-212ENST00000587197 ACTR3CQ9C0K3 210 aaPredicted RBP12.67□□□□□ -0.38
DNMT1-212ENST00000587197 PRELID1Q9Y255 219 aa12.67□□□□□ -0.38
DNMT1-212ENST00000587197 STAB2Q8WWQ8 2551 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
DNMT1-212ENST00000587197 TPT1P13693 172 aaKnown RBP12.66□□□□□ -0.38
DNMT1-212ENST00000587197 C4BPBP20851 252 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 LYPD1Q8N2G4 141 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 IL17DQ8TAD2 202 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 RAB24Q969Q5 203 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms