RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TCTE3Q8IZS6 198 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 THAP8Q8NA92 274 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 C1QTNF4Q9BXJ3 329 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 NPVFQ9HCQ7 196 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
LIG3-207ENST00000586119 IGKV1D-37A0A075B6S9 117 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 CST7O76096 145 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 CFDP00746 253 aaPredicted RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 NUP62P37198 522 aaPredicted RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 IFITM2Q01629 132 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 ZNF90Q03938 601 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 SLC38A11Q08AI6 406 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 VWC2Q2TAL6 325 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 UBE2DNLQ8IWF7 75 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 C1orf158Q8N1D5 194 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 ST6GAL2Q96JF0 529 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 NEU1Q99519 415 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 TRGV9Q99603 122 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 PBDC1Q9BVG4 233 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 TMEM147Q9BVK8 224 aa8.25□□□□□ -1.09
LIG3-207ENST00000586119 SAV1Q9H4B6 383 aaPredicted RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 SEPSECSQ9HD40 501 aaKnown RBP8.25□□□□□ -1.09
LIG3-207ENST00000586119 ZFP92A6NM28 416 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 SOCS3O14543 225 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 AKR1C1Q04828 323 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 ARL16Q0P5N6 197 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 INO80EQ8NBZ0 244 aaPredicted RBP8.24□□□□□ -1.09
LIG3-207ENST00000586119 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 C20orf173Q96LM9 149 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 AQP10Q96PS8 301 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 NIPSNAP3BQ9BS92 247 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 UQCC1Q9NVA1 299 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 HSPB11Q9Y547 144 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 LRP1BQ9NZR2 4599 aa8.24□□□□□ -1.09
LIG3-207ENST00000586119 SMCO3A2RU48 225 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 SELENOTP62341 195 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 NHLH2Q02577 135 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 OR2F1Q13607 317 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 RAB31Q13636 194 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 Q5BKY6 102 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 TEPPQ6URK8 271 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 ZNF546Q86UE3 836 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 OR5C1Q8NGR4 320 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 C17orf77Q96MU5 243 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 TNFSF18Q9UNG2 199 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 RFNGQ9Y644 331 aa8.23□□□□□ -1.09
LIG3-207ENST00000586119 FXYD6-FXYD2A0A087WZ82 144 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 SMIM9A6NGZ8 99 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 HMSDA8MTL9 139 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 G3V3Q6 166 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 MPDU1O75352 247 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 FAM78BQ5VT40 261 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 TMEM88Q6PEY1 159 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 WDR83OSQ9Y284 106 aa8.22□□□□□ -1.09
LIG3-207ENST00000586119 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
LIG3-207ENST00000586119 IGKV1OR2-108A0A075B7D4 117 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 C1QBP02746 253 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 PRB4P10163 310 aaPredicted RBP8.21□□□□□ -1.1
LIG3-207ENST00000586119 S100A7P31151 101 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 LYZP61626 148 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 PSG9Q00887 426 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 TNP2Q05952 138 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 IGFL4Q6B9Z1 124 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 BPIFCQ8NFQ6 507 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 ATP5SQ99766 215 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 PARD6GQ9BYG4 376 aaPredicted RBP8.21□□□□□ -1.1
LIG3-207ENST00000586119 PFDN2Q9UHV9 154 aa8.21□□□□□ -1.1
LIG3-207ENST00000586119 LOC102723971A0A1B0GUV8 181 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 TMEM189A5PLL7 270 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 ZNF705GA8MUZ8 300 aaPredicted RBP8.2□□□□□ -1.1
LIG3-207ENST00000586119 TAAR5O14804 337 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 IFNA5P01569 189 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 ZNF266Q14584 549 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 C1orf134Q5TEV5 83 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 PXDC1Q5TGL8 231 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 TMEM182Q6ZP80 229 aaPredicted RBP8.2□□□□□ -1.1
LIG3-207ENST00000586119 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 KCNIP2Q9NS61 270 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 SLC45A2Q9UMX9 530 aa8.2□□□□□ -1.1
LIG3-207ENST00000586119 A0A0J9YX75 114 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 UBE2L5PA0A1B0GUS4 154 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 ARPC5O15511 151 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 HBE1P02100 147 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 GATA2P23769 480 aaPredicted RBP8.19□□□□□ -1.1
LIG3-207ENST00000586119 ID1P41134 155 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
LIG3-207ENST00000586119 CAMLGP49069 296 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 PSMB3P49720 205 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 NKX2-5P52952 324 aaPredicted RBP8.19□□□□□ -1.1
LIG3-207ENST00000586119 PLP1P60201 277 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 ZNF345Q14585 488 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 CLINT1Q14677 625 aa8.19□□□□□ -1.1
LIG3-207ENST00000586119 RNF212Q495C1 297 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms