RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	ATF4	P18848	351 aa	Predicted RBP	13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	BMI1	P35226	326 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	MYCNOS	P40205	109 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	MEOX2	P50222	304 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	CCDC28A	Q8IWP9	274 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	C11orf52	Q96A22	123 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	RPUSD4	Q96CM3	377 aa	Known RBP	13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	NIPSNAP3B	Q9BS92	247 aa		13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	DAZ1	Q9NQZ3	744 aa	Known RBP	13.62	□□□□□ -0.23
RBFOX1-222	ENST00000585867	TRBV19	A0A075B6N1	114 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	GGTLC3	B5MD39	225 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	SUMO1	P63165	101 aa	Known RBP	13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	UNQ9165/PRO28630	Q6UXU0	137 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	REC114	Q7Z4M0	266 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ELOVL1	Q9BW60	279 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	OTOR	Q9NRC9	128 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ZNF586	Q9NXT0	402 aa		13.61	□□□□□ -0.23
RBFOX1-222	ENST00000585867		A0A087X0K7	114 aa		13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ZNF727	A8MUV8	499 aa		13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867		H3BQ15	152 aa		13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867	PF4	P02776	101 aa		13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867	RAN	P62826	216 aa	Known RBP	13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867	SMIM7	Q9BQ49	75 aa		13.6	□□□□□ -0.23
RBFOX1-222	ENST00000585867	SCO2	A0A1W2PP80	73 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	LGALS9	O00182	355 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ZNF207	O43670	478 aa	Known RBP	13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ZNF253	O75346	499 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	PSG9	Q00887	426 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	PARL	Q9H300	379 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867		Q9H3A6	140 aa		13.59	□□□□□ -0.23
RBFOX1-222	ENST00000585867	SLURP1	P55000	103 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	PNRC1	Q12796	327 aa	Predicted RBP	13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	FHL3	Q13643	280 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	GUCA2B	Q16661	112 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	ZNF674	Q2M3X9	581 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	C16orf54	Q6UWD8	224 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	C1QL4	Q86Z23	238 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	C5orf17	Q8NAS9	161 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	HIST1H2BA	Q96A08	127 aa		13.58	□□□□□ -0.23
RBFOX1-222	ENST00000585867	IGHV7-4-1	A0A0J9YVY3	117 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	PGP	A6NDG6	321 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867		A8MWP6	167 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	NDUFB4	O95168	129 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SLC25A5	P05141	298 aa	Known RBP	13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	HOXD3	P31249	432 aa	Predicted RBP	13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	TVP23C	Q96ET8	276 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	AAMDC	Q9H7C9	122 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	NAT8	Q9UHE5	227 aa		13.58	□□□□□ -0.24
RBFOX1-222	ENST00000585867	ZNF785	A8K8V0	405 aa		13.57	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SIGLEC15	Q6ZMC9	328 aa		13.57	□□□□□ -0.24
RBFOX1-222	ENST00000585867	IGHV3-66	A0A0C4DH42	116 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	PEX7	O00628	323 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	APOH	P02749	345 aa	Predicted RBP	13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SNRPC	P09234	159 aa	Known RBP	13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	TMEM241	Q24JQ0	296 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CLRN3	Q8NCR9	226 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CMTM2	Q8TAZ6	248 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	GLMP	Q8WWB7	406 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	DLX4	Q92988	240 aa	Predicted RBP	13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SLC50A1	Q9BRV3	221 aa		13.56	□□□□□ -0.24
RBFOX1-222	ENST00000585867	HELT	A6NFD8	242 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867		H3BTX0	84 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867		M0R036	132 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	AKR1C3	P42330	323 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CNN1	P51911	297 aa	Known RBP	13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	KLF5	Q13887	457 aa	Predicted RBP	13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	TM4SF20	Q53R12	229 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	ARL6IP6	Q8N6S5	226 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	ATG101	Q9BSB4	218 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SMPX	Q9UHP9	88 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	EPDR1	Q9UM22	224 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SMAD5-AS1	Q9Y6J3	95 aa		13.55	□□□□□ -0.24
RBFOX1-222	ENST00000585867	IGHV3-49	A0A0A0MS15	119 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	S100A9	P06702	114 aa	Known RBP	13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SYNJ2BP	P57105	145 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	RHEB	Q15382	184 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	LINC00482	Q8N8I6	264 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	C2CD4C	Q8TF44	421 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CLEC5A	Q9NY25	188 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	IGHV3OR16-13	A0A075B7E8	117 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	IGHV3-74	A0A0B4J1X5	117 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867		B4DEV8	164 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867		C9JCJ5	164 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	C17orf77	Q96MU5	243 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	RHPN1-AS1	Q9BWJ2	59 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SDF2L1	Q9HCN8	221 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867	PEMT	Q9UBM1	199 aa		13.54	□□□□□ -0.24
RBFOX1-222	ENST00000585867		K7EQM0	130 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SLC17A3	O00476	420 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CHEK1	O14757	476 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	RPL35	P42766	123 aa	Known RBP	13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	CSN1S1	P47710	185 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	TAS2R60	P59551	318 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	EXOC3-AS1	Q8N2X6	119 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	PRELID1	Q9Y255	219 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	LY96	Q9Y6Y9	160 aa		13.53	□□□□□ -0.24
RBFOX1-222	ENST00000585867	SERTM2	A0A1B0GWG4	89 aa		13.52	□□□□□ -0.25
RBFOX1-222	ENST00000585867	TMEM213	A2RRL7	107 aa		13.52	□□□□□ -0.25
RBFOX1-222	ENST00000585867	OVOL1	O14753	267 aa		13.52	□□□□□ -0.25
RBFOX1-222	ENST00000585867	TCRA	P04437	139 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms