RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 OXTP01178 125 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PPIFP30405 207 aaKnown RBP9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TNFAIP6P98066 277 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 SIGLECL1Q8N7X8 197 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF835Q9Y2P0 537 aa9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TIMM8BQ9Y5J9 83 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 RAI1Q7Z5J4 1906 aaPredicted RBP9.31□□□□□ -0.92
CDK5RAP3-231ENST00000584063 GGTLC3B5MD39 225 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 MGST3O14880 152 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF253O75346 499 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF503Q96F45 646 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 VKORC1Q9BQB6 163 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IDI2-AS1Q9NZ38 188 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 INSIG2Q9Y5U4 225 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 V9GYV3 84 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF462Q96JM2 2506 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LINC00869P0C866 280 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 C11orf44Q8N8P7 122 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CCL17Q92583 94 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 MS4A6AQ9H2W1 248 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LSM4Q9Y4Z0 139 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 USP24Q9UPU5 2620 aa9.3□□□□□ -0.92
CDK5RAP3-231ENST00000584063 C15orf61A6NNL5 157 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 WNK2Q9Y3S1 2297 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 YPEL3P61236 119 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PMCHL1Q16048 86 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TMEM183BQ1AE95 376 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TMEM101Q96IK0 257 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 USP9XQ93008 2570 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 YPEL1O60688 119 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IGHV1-46P01743 117 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CD99P14209 185 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DTX2Q86UW9 622 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DDB2Q92466 427 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 YPEL2Q96QA6 119 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 NRN1Q9NPD7 142 aa9.29□□□□□ -0.92
CDK5RAP3-231ENST00000584063 HRNRQ86YZ3 2850 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 PRSS29PA6NIE9 313 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 CCL3L1P16619 93 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 DYNLRB1Q9NP97 96 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 IGHV3-72A0A0B4J1Y9 119 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 MPDU1O75352 247 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LHBP01229 141 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 LINC00694P0DN24 101 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 RASL11AQ6T310 242 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 OR4A5Q8NH83 315 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 GAFA1Q96PS6 74 aa9.28□□□□□ -0.92
CDK5RAP3-231ENST00000584063 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 CGB3P0DN86 165 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 CGB7P0DN87 165 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 CA7P43166 264 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 RUSC1-AS1Q66K80 236 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 Q6ZN92 141 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 Q96MF0 132 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 A0A1W2PS18 150 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TMEM8BA6NDV4 472 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 GPX1P07203 203 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 COL8A1P27658 744 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TMEM86BQ8N661 226 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 C16orf92Q96LL3 132 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TMEM126AQ9H061 195 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 DSCAML1Q8TD84 2053 aa9.27□□□□□ -0.93
CDK5RAP3-231ENST00000584063 FHL3Q13643 280 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 IGHV1-69-2A0A0G2JMI3 117 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TEX50A0A1B0GTY4 177 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 H3BS24 57 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 BMPR1BO00238 502 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 SAA1P0DJI8 122 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 XGP55808 180 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 UBE2L3P68036 154 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PRR20EP86478 221 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PRR20CP86479 221 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PRR20DP86480 221 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PRR20BP86481 221 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PRR20AP86496 221 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 PSG9Q00887 426 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 Q71RC1 249 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 SAP30LQ9HAJ7 183 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 MRPL36Q9P0J6 103 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
CDK5RAP3-231ENST00000584063 IGLV3-9A0A075B6K5 115 aa9.25□□□□□ -0.93
CDK5RAP3-231ENST00000584063 TRGV10A0A0A0MS01 117 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms