RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 SPAG8Q99932 426 aaPredicted RBP6.27□□□□□ -1.41
ERBB2-216ENST00000584014 WFDC10AQ9H1F0 79 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 SLC25A32Q9H2D1 315 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 KCNIP2Q9NS61 270 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 U3KQE9 123 aa6.27□□□□□ -1.41
ERBB2-216ENST00000584014 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
ERBB2-216ENST00000584014 OR11H12B2RN74 326 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 H3BRN7 92 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 H3BTX0 84 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 K7EIL1 84 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 EIF3GO75821 320 aaKnown RBP eCLIP6.26□□□□□ -1.41
ERBB2-216ENST00000584014 ZNF688P0C7X2 276 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 CXCL2P19875 107 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 GALR1P47211 349 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 ZFP69Q49AA0 526 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 KPRPQ5T749 579 aaPredicted RBP6.26□□□□□ -1.41
ERBB2-216ENST00000584014 PXDC1Q5TGL8 231 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 FAM90A2PQ658T7 463 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 APRG1Q8IVJ8 170 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 DEFB125Q8N687 156 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 OR4C5Q8NGB2 326 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 LINC00052Q96N35 136 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 PFDN5Q99471 154 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 SHANK2-AS3Q9BTD1 123 aa6.26□□□□□ -1.41
ERBB2-216ENST00000584014 A0A0D9SG52 128 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 HMSDA8MTL9 139 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 CD5P06127 495 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
ERBB2-216ENST00000584014 ATP6V0CP27449 155 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 DEFB131AP59861 70 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 ACOT6Q3I5F7 207 aaPredicted RBP6.25□□□□□ -1.41
ERBB2-216ENST00000584014 C1orf194Q5T5A4 169 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 MORN5Q5VZ52 161 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 TMUB2Q71RG4 321 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 CCDC28AQ8IWP9 274 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 TCTE3Q8IZS6 198 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 FAM24BQ8N5W8 94 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 C16orf92Q96LL3 132 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 ASCL2Q99929 193 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 ZNF471Q9BX82 626 aaPredicted RBP6.25□□□□□ -1.41
ERBB2-216ENST00000584014 SH3BGRL3Q9H299 93 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 SMAD5-AS1Q9Y6J3 95 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 SORL1Q92673 2214 aa6.25□□□□□ -1.41
ERBB2-216ENST00000584014 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 TAAR5O14804 337 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 HMGB3O15347 200 aaKnown RBP6.24□□□□□ -1.41
ERBB2-216ENST00000584014 MBP02144 154 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 C1QBP02746 253 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 RPL35AP18077 110 aaKnown RBP6.24□□□□□ -1.41
ERBB2-216ENST00000584014 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
ERBB2-216ENST00000584014 ID1P41134 155 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 PLP1P60201 277 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 RAB2AP61019 212 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 PSMG4Q5JS54 123 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 MIR17HGQ75NE6 70 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 BPIFA4PQ86YQ2 179 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 Q8N1Y9 231 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 OR2G3Q8NGZ4 309 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 GATAD1Q8WUU5 269 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 BLNKQ8WV28 456 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 SRD5A3Q9H8P0 318 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 NRN1Q9NPD7 142 aa6.24□□□□□ -1.41
ERBB2-216ENST00000584014 KNCNA6PVL3 124 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 K7EQG2 157 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 BCL2L11O43521 198 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 OR7C2O60412 319 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 JTBO76095 146 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 PYYP10082 97 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 NKX2-5P52952 324 aaPredicted RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 RHOBP62745 196 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 LGALSLQ3ZCW2 172 aaPredicted RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 GNPNAT1Q96EK6 184 aaPredicted RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 HYLS1Q96M11 299 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 GPR82Q96P67 336 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 ALKBH7Q9BT30 221 aaPredicted RBP6.23□□□□□ -1.41
ERBB2-216ENST00000584014 MAP6D1Q9H9H5 199 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 RNF24Q9Y225 148 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 FUT9Q9Y231 359 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 TIMM9Q9Y5J7 89 aa6.23□□□□□ -1.41
ERBB2-216ENST00000584014 IGKV3-20P01619 116 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 OR10J4P0C629 311 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 FRMD6-AS1P0C7T7 363 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 CMC4P56277 68 aaPredicted RBP6.22□□□□□ -1.41
ERBB2-216ENST00000584014 DEFB1P60022 68 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 ZNF345Q14585 488 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 ODF3L2Q3SX64 289 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 ACTL10Q5JWF8 245 aa6.22□□□□□ -1.41
ERBB2-216ENST00000584014 AKR1C8PQ5T2L2 129 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms