RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 RARRES2Q99969 163 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
SKA2-209ENST00000583976 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 DYNC1H1Q14204 4646 aaKnown RBP11.41□□□□□ -0.58
SKA2-209ENST00000583976 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 ZNF688P0C7X2 276 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 DEFB131AP59861 70 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 ZNF266Q14584 549 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 HSD17B11Q8NBQ5 300 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 PFDN5Q99471 154 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 PARD6GQ9BYG4 376 aaPredicted RBP11.41□□□□□ -0.58
SKA2-209ENST00000583976 KCNIP2Q9NS61 270 aa11.41□□□□□ -0.58
SKA2-209ENST00000583976 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
SKA2-209ENST00000583976 RPL7P18124 248 aaKnown RBP11.4□□□□□ -0.58
SKA2-209ENST00000583976 RPL7L1Q6DKI1 246 aaKnown RBP11.4□□□□□ -0.58
SKA2-209ENST00000583976 C11orf45Q8TAV5 145 aa11.4□□□□□ -0.58
SKA2-209ENST00000583976 GATAD1Q8WUU5 269 aa11.4□□□□□ -0.58
SKA2-209ENST00000583976 GPR82Q96P67 336 aa11.4□□□□□ -0.58
SKA2-209ENST00000583976 CMC4P56277 68 aaPredicted RBP11.39□□□□□ -0.59
SKA2-209ENST00000583976 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
SKA2-209ENST00000583976 AKAP14Q86UN6 197 aa11.39□□□□□ -0.59
SKA2-209ENST00000583976 BORCS7-ASMTA0A0B4J1R7 106 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 HMSDA8MTL9 139 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 PSMG4Q5JS54 123 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 BPIFA4PQ86YQ2 179 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 LINC00052Q96N35 136 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 SEPSECSQ9HD40 501 aaKnown RBP11.38□□□□□ -0.59
SKA2-209ENST00000583976 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
SKA2-209ENST00000583976 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 H3BTX0 84 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 MRPS12O15235 138 aaKnown RBP11.37□□□□□ -0.59
SKA2-209ENST00000583976 CXCL2P19875 107 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 ATP6V0CP27449 155 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 SNRPD3P62318 126 aaKnown RBP11.37□□□□□ -0.59
SKA2-209ENST00000583976 CD300CQ08708 224 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 IGFL4Q6B9Z1 124 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 MIR17HGQ75NE6 70 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 KCNRGQ8N5I3 272 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 Q8NAQ8 132 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 AGRNO00468 2067 aa11.37□□□□□ -0.59
SKA2-209ENST00000583976 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 SOCS3O14543 225 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 TAAR5O14804 337 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
SKA2-209ENST00000583976 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
SKA2-209ENST00000583976 C4BPBP20851 252 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 ID1P41134 155 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 MEOX2P50222 304 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 LRRC20Q8TCA0 184 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 ARPC5LQ9BPX5 153 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 TIMM9Q9Y5J7 89 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 RYR1P21817 5038 aa11.36□□□□□ -0.59
SKA2-209ENST00000583976 A0A0D9SG52 128 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 DEFB1P60022 68 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 RAB2AP61019 212 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 ZNF345Q14585 488 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 ACOT6Q3I5F7 207 aaPredicted RBP11.35□□□□□ -0.59
SKA2-209ENST00000583976 C2CD4CQ8TF44 421 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 SLC25A2Q9BXI2 301 aa11.35□□□□□ -0.59
SKA2-209ENST00000583976 IGHV4-28A0A0C4DH34 117 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 H3BQ15 152 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 ISLRO14498 428 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 RBMY1A1P0DJD3 496 aaKnown RBP11.34□□□□□ -0.59
SKA2-209ENST00000583976 RBMY1CP0DJD4 496 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 PYYP10082 97 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 PSMB3P49720 205 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 RBMY1FQ15415 496 aaKnown RBP11.34□□□□□ -0.59
SKA2-209ENST00000583976 ACTL10Q5JWF8 245 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 FAM122CQ6P4D5 195 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 C20orf173Q96LM9 149 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
SKA2-209ENST00000583976 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
SKA2-209ENST00000583976 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
SKA2-209ENST00000583976 A0A087X0K7 114 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 TRAV8-2A0A0B4J237 113 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 KANTRA0A1W2PQU2 76 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 IGLL5B9A064 214 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 PFDN1O60925 122 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 C1QBP02746 253 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 PRB4P10163 310 aaPredicted RBP11.33□□□□□ -0.6
SKA2-209ENST00000583976 M6PRP20645 277 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 HLA-DMBP28068 263 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 RHOBP62745 196 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 TMUB2Q71RG4 321 aa11.33□□□□□ -0.6
SKA2-209ENST00000583976 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
SKA2-209ENST00000583976 STHQ8IWL8 128 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms