RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 LY6G6CO95867 125 aa19.33■□□□□ 0.68
LINC00271-207ENST00000580741 FGF7P21781 194 aa19.33■□□□□ 0.68
LINC00271-207ENST00000580741 CNN1P51911 297 aaKnown RBP19.33■□□□□ 0.68
LINC00271-207ENST00000580741 NHLH2Q02577 135 aa19.33■□□□□ 0.68
LINC00271-207ENST00000580741 OPCMLQ14982 345 aa19.33■□□□□ 0.68
LINC00271-207ENST00000580741 HRH4Q9H3N8 390 aa19.33■□□□□ 0.68
LINC00271-207ENST00000580741 A8MTW9 85 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 ZNF705FA8MVS1 300 aaPredicted RBP19.32■□□□□ 0.68
LINC00271-207ENST00000580741 H0YIZ8 118 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 H3BTX0 84 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 SSNA1O43805 119 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 CXCL3P19876 107 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 H2BFSP57053 126 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 AMTNQ6UX39 209 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 Q6ZRG5 221 aa19.32■□□□□ 0.68
LINC00271-207ENST00000580741 RLN2P04090 185 aa19.31■□□□□ 0.68
LINC00271-207ENST00000580741 ZNF767PQ75MW2 155 aa19.31■□□□□ 0.68
LINC00271-207ENST00000580741 DNAJC4Q9NNZ3 241 aa19.31■□□□□ 0.68
LINC00271-207ENST00000580741 SLC39A9Q9NUM3 307 aa19.31■□□□□ 0.68
LINC00271-207ENST00000580741 RNF24Q9Y225 148 aa19.31■□□□□ 0.68
LINC00271-207ENST00000580741 TRAV5A0A0B4J249 113 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 E5RGE8 158 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 B2MP61769 119 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 ATP6V1FQ16864 119 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 Q6ZTC4 211 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 BPIFA4PQ86YQ2 179 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 OR11H7Q8NGC8 314 aa19.3■□□□□ 0.68
LINC00271-207ENST00000580741 DUSP14O95147 198 aaKnown RBP19.29■□□□□ 0.68
LINC00271-207ENST00000580741 RPL29P47914 159 aaKnown RBP19.29■□□□□ 0.68
LINC00271-207ENST00000580741 EMP1P54849 157 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 PSG3Q16557 428 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 C1orf158Q8N1D5 194 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 OR5C1Q8NGR4 320 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 NEU1Q99519 415 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 GOLT1BQ9Y3E0 138 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 PXMP4Q9Y6I8 212 aa19.29■□□□□ 0.68
LINC00271-207ENST00000580741 M0R2Z0 102 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 CYCSP99999 105 aaKnown RBP19.28■□□□□ 0.68
LINC00271-207ENST00000580741 HIST1H1AQ02539 215 aaPredicted RBP19.28■□□□□ 0.68
LINC00271-207ENST00000580741 SPINK13Q1W4C9 94 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 LCN15Q6UWW0 184 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 OR1L4Q8NGR5 311 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 THAP6Q8TBB0 222 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 PPP1R1CQ8WVI7 109 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 SLC25A31Q9H0C2 315 aa19.28■□□□□ 0.68
LINC00271-207ENST00000580741 KMT2AQ03164 3969 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 VPS13DQ5THJ4 4388 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 SLC17A3O00476 420 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 CLINT1Q14677 625 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 OR8A1Q8NGG7 326 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 C2CD4CQ8TF44 421 aa19.27■□□□□ 0.68
LINC00271-207ENST00000580741 ZNF331Q9NQX6 463 aaPredicted RBP19.27■□□□□ 0.68
LINC00271-207ENST00000580741 H3BQ15 152 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 IGLC2P0DOY2 106 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 CXCL2P19875 107 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 C12orf74Q32Q52 190 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 RPUSD4Q96CM3 377 aaKnown RBP19.26■□□□□ 0.67
LINC00271-207ENST00000580741 PFDN5Q99471 154 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 NPCDR1Q9BY65 106 aa19.26■□□□□ 0.67
LINC00271-207ENST00000580741 SMIM9A6NGZ8 99 aa19.25■□□□□ 0.67
LINC00271-207ENST00000580741 CHAC2Q8WUX2 184 aa19.25■□□□□ 0.67
LINC00271-207ENST00000580741 IGF2BP2-AS1Q96M15 143 aa19.25■□□□□ 0.67
LINC00271-207ENST00000580741 SLC50A1Q9BRV3 221 aa19.25■□□□□ 0.67
LINC00271-207ENST00000580741 RFNGQ9Y644 331 aa19.25■□□□□ 0.67
LINC00271-207ENST00000580741 EPPK1P58107 5090 aaKnown RBP19.25■□□□□ 0.67
LINC00271-207ENST00000580741 IGLL5B9A064 214 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 C11orf94C9JXX5 98 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 CRXO43186 299 aaPredicted RBP19.24■□□□□ 0.67
LINC00271-207ENST00000580741 RHOBP62745 196 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 GCSAMLQ5JQS6 135 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 BAP18Q8IXM2 172 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 RNF126Q9BV68 326 aa19.24■□□□□ 0.67
LINC00271-207ENST00000580741 MPDU1O75352 247 aa19.23■□□□□ 0.67
LINC00271-207ENST00000580741 TMEM208Q9BTX3 173 aa19.23■□□□□ 0.67
LINC00271-207ENST00000580741 TRAV12-2A0A075B6T6 113 aa19.22■□□□□ 0.67
LINC00271-207ENST00000580741 TRAV10A0A0B4J240 114 aa19.22■□□□□ 0.67
LINC00271-207ENST00000580741 BOLA2-SMG1P6H3BVE0 249 aa19.22■□□□□ 0.67
LINC00271-207ENST00000580741 MPC2O95563 127 aa19.22■□□□□ 0.67
LINC00271-207ENST00000580741 HBE1P02100 147 aa19.22■□□□□ 0.67
LINC00271-207ENST00000580741 LOC102723971A0A1B0GUV8 181 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 PRAC2D3DTV9 90 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 INSP01308 110 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 AMBPP02760 352 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 PRM2P04554 102 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 SAT2Q96F10 170 aaPredicted RBP19.21■□□□□ 0.67
LINC00271-207ENST00000580741 PPP1R14DQ9NXH3 145 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 ZNF586Q9NXT0 402 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 ALG5Q9Y673 324 aa19.21■□□□□ 0.67
LINC00271-207ENST00000580741 TMEM189A5PLL7 270 aa19.2■□□□□ 0.66
LINC00271-207ENST00000580741 RRN3P1Q2M238 152 aa19.2■□□□□ 0.66
LINC00271-207ENST00000580741 SPART-AS1P0CW21 52 aa19.19■□□□□ 0.66
LINC00271-207ENST00000580741 WDR61Q9GZS3 305 aaKnown RBP19.19■□□□□ 0.66
LINC00271-207ENST00000580741 MBD2Q9UBB5 411 aa19.19■□□□□ 0.66
LINC00271-207ENST00000580741 ZNF705GA8MUZ8 300 aaPredicted RBP19.18■□□□□ 0.66
LINC00271-207ENST00000580741 FAM222AQ5U5X8 452 aa19.18■□□□□ 0.66
LINC00271-207ENST00000580741 PLA2G2EQ9NZK7 142 aa19.18■□□□□ 0.66
LINC00271-207ENST00000580741 APLNQ9ULZ1 77 aa19.18■□□□□ 0.66
LINC00271-207ENST00000580741 DEFB131BA0A096LNP1 70 aa19.17■□□□□ 0.66
LINC00271-207ENST00000580741 PET100P0DJ07 73 aa19.17■□□□□ 0.66
LINC00271-207ENST00000580741 PYYP10082 97 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms