RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
SMARCE1-216ENST00000580419 ARL6Q9H0F7 186 aa10.28□□□□□ -0.76
SMARCE1-216ENST00000580419 C20orf85Q9H1P6 137 aa10.28□□□□□ -0.76
SMARCE1-216ENST00000580419 AGPAT2O15120 278 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 LYRM1O43325 122 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 TCRBP04435 133 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 EMP1P54849 157 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 TAS2R60P59551 318 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 DAD1P61803 113 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF846Q147U1 533 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 GUK1Q16774 197 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 Q6ZR54 194 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF767PQ75MW2 155 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF738Q8NE65 137 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 UHRF2Q96PU4 802 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 CCDC32Q9BV29 185 aa10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF331Q9NQX6 463 aaPredicted RBP10.27□□□□□ -0.77
SMARCE1-216ENST00000580419 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF253O75346 499 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 CDKN1BP46527 198 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 LINC00305Q7Z4B0 112 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF431Q8TF32 576 aaPredicted RBP10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 ODF3Q96PU9 254 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 C11orf1Q9H5F2 150 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 GSKIPQ9P0R6 139 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
SMARCE1-216ENST00000580419 KIAA1109Q2LD37 5005 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 M0R2Z0 102 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 CCNKO75909 580 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 RRAS2P62070 204 aaPredicted RBP10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 SLC38A11Q08AI6 406 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 ARL16Q0P5N6 197 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 IL15RAQ13261 267 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 RNF182Q8N6D2 247 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 LRRC20Q8TCA0 184 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 RPUSD4Q96CM3 377 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 C2orf50Q96LR7 162 aa10.25□□□□□ -0.77
SMARCE1-216ENST00000580419 CBY3A6NI87 242 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 H7BYZ3 331 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 L7N2F9 121 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 SCGB1D2O95969 90 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 RPL29P47914 159 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 VAMP2P63027 116 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 FGL1Q08830 312 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 Q6ZRG5 221 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 OR1L4Q8NGR5 311 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 TMEM37Q8WXS4 190 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 MRPL53Q96EL3 112 aaKnown RBP10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 C16orf74Q96GX8 76 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 PFDN5Q99471 154 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 MGST2Q99735 147 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 DNAJC4Q9NNZ3 241 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 PKD1P98161 4303 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 MUC4Q99102 2169 aa10.24□□□□□ -0.77
SMARCE1-216ENST00000580419 COX7A2P2O60397 106 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 MPDU1O75352 247 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 S100A11P31949 105 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 CAMLGP49069 296 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 ATP6V1FQ16864 119 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 C10orf113Q5VZT2 155 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 TMEM263Q8WUH6 116 aaKnown RBP10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 LYRM2Q9NU23 88 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 NUDT15Q9NV35 164 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 UQCC1Q9NVA1 299 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 TIMM8BQ9Y5J9 83 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
SMARCE1-216ENST00000580419 LINC00854A0A1B0GVQ3 168 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 RTL8CO15255 209 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 ATP5G1P05496 136 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 ATP5G3P48201 142 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 SULT1A1P50225 295 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 RHOBP62745 196 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 HBG1P69891 147 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 HBG2P69892 147 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 HIST1H1AQ02539 215 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 TMEM88Q6PEY1 159 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 BAP18Q8IXM2 172 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 C12orf45Q8N5I9 185 aaPredicted RBP10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF503Q96F45 646 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 PPP1R14DQ9NXH3 145 aa10.22□□□□□ -0.77
SMARCE1-216ENST00000580419 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 PDE6HQ13956 83 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 OPCMLQ14982 345 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 NRARPQ7Z6K4 114 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 OR10J6PQ8NGY7 276 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 LINC01587Q99440 93 aa10.21□□□□□ -0.77
SMARCE1-216ENST00000580419 TMEM14CQ9P0S9 112 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms