RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 OR10J4P0C629 311 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 MEOX2P50222 304 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 GUK1Q16774 197 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 MAP1LC3BQ9GZQ8 125 aa11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-212ENST00000580061 H3BTX0 84 aa11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 H2AFB1P0C5Y9 115 aa11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 UBE2L3P68036 154 aaKnown RBP11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 ZNF680Q8NEM1 530 aa11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 SAT2Q96F10 170 aaPredicted RBP11.89□□□□□ -0.51
CSNK1D-212ENST00000580061 MGAM2Q2M2H8 2515 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 TRBV19A0A075B6N1 114 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 GCHFRP30047 84 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 FGF8P55075 233 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 SUN5Q8TC36 379 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 SFT2D1Q8WV19 159 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
CSNK1D-212ENST00000580061 TRAV8-2A0A0B4J237 113 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 SLC17A3O00476 420 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 ISLRO14498 428 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 ZNF253O75346 499 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 NDUFB4O95168 129 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 IFNA7P01567 189 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 PDE6HQ13956 83 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
CSNK1D-212ENST00000580061 CD7P09564 240 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 PSMB3P49720 205 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 LRRC20Q8TCA0 184 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 TMPRSS5Q9H3S3 457 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 UBQLN2Q9UHD9 624 aa11.86□□□□□ -0.51
CSNK1D-212ENST00000580061 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 ID1P41134 155 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 CD81P60033 236 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 GTSCR1Q86UQ5 136 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 PRR25Q96S07 402 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
CSNK1D-212ENST00000580061 A0A1B0GV50 99 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 HBE1P02100 147 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 HLA-DMBP28068 263 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 SNRPD3P62318 126 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 PSG9Q00887 426 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 IFITM2Q01629 132 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 Q8N1Y9 231 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 C19orf73Q9NVV2 129 aa11.84□□□□□ -0.51
CSNK1D-212ENST00000580061 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 DEFB131AP59861 70 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 PSMG4Q5JS54 123 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 LYPD1Q8N2G4 141 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 LINC00052Q96N35 136 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.52
CSNK1D-212ENST00000580061 OR11H12B2RN74 326 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 CCL20P78556 96 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 PSG3Q16557 428 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 Q9H3A6 140 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
CSNK1D-212ENST00000580061 NOTCH1P46531 2555 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 ICAM4Q14773 271 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 ZNF767PQ75MW2 155 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 APRG1Q8IVJ8 170 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
CSNK1D-212ENST00000580061 A0A1W2PRE2 83 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 M0R3E3 92 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 PPT1P50897 306 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 UBE2G2P60604 165 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 ZNF124Q15973 351 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 PCNPQ8WW12 178 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 AURKAIP1Q9NWT8 199 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 YTHDF2Q9Y5A9 579 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
CSNK1D-212ENST00000580061 PGPA6NDG6 321 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 FAM74A7A6NL05 159 aa11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-212ENST00000580061 NMBP08949 121 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms