RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 OR10G7Q8NGN6 311 aa16.79■□□□□ 0.28
NDEL1-207ENST00000580012 C20orf173Q96LM9 149 aa16.79■□□□□ 0.28
NDEL1-207ENST00000580012 ZNF586Q9NXT0 402 aa16.79■□□□□ 0.28
NDEL1-207ENST00000580012 SPP1P10451 314 aa16.78■□□□□ 0.28
NDEL1-207ENST00000580012 ZNF503Q96F45 646 aa16.78■□□□□ 0.28
NDEL1-207ENST00000580012 ZNF331Q9NQX6 463 aaPredicted RBP16.78■□□□□ 0.28
NDEL1-207ENST00000580012 LOC102724200A0A096LPH7 203 aaPredicted RBP16.77■□□□□ 0.28
NDEL1-207ENST00000580012 HAGHQ16775 308 aa16.77■□□□□ 0.28
NDEL1-207ENST00000580012 LCN15Q6UWW0 184 aa16.77■□□□□ 0.28
NDEL1-207ENST00000580012 LINC00052Q96N35 136 aa16.77■□□□□ 0.28
NDEL1-207ENST00000580012 OR51M1Q9H341 326 aa16.77■□□□□ 0.28
NDEL1-207ENST00000580012 RPRMQ9NS64 109 aa16.77■□□□□ 0.28
NDEL1-207ENST00000580012 TRBV19A0A075B6N1 114 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 ZNF253O75346 499 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 SNRPCP09234 159 aaKnown RBP16.76■□□□□ 0.27
NDEL1-207ENST00000580012 PYYP10082 97 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 IGFL4Q6B9Z1 124 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 FXYD5Q96DB9 178 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 SLC50A1Q9BRV3 221 aa16.76■□□□□ 0.27
NDEL1-207ENST00000580012 A0A1W2PPV4 95 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 KNCNA6PVL3 124 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 NDUFB4O95168 129 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 TAS2R45P59539 299 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 ZFP69Q49AA0 526 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 TMEM41BQ5BJD5 291 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 ASCL2Q99929 193 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 PAXXQ9BUH6 204 aa16.75■□□□□ 0.27
NDEL1-207ENST00000580012 ZNF471Q9BX82 626 aaPredicted RBP16.75■□□□□ 0.27
NDEL1-207ENST00000580012 KIR2DL5BA0A0G2JN68 375 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 KIR2DL5BA0A0G2JPC4 375 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 H3BTX0 84 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 SLC17A3O00476 420 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 PFDN1O60925 122 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 SEC11BP0C7V7 166 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 NHLRC4P0CG21 123 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-207ENST00000580012 EIF5AP63241 154 aaKnown RBP16.74■□□□□ 0.27
NDEL1-207ENST00000580012 PDE6HQ13956 83 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 FAM122CQ6P4D5 195 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 FOXI2Q6ZQN5 318 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 TRPT1Q86TN4 253 aaKnown RBP16.74■□□□□ 0.27
NDEL1-207ENST00000580012 KIR2DL5AQ8N109 375 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 C9orf62Q8N4C0 152 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 KIR2DL5BQ8NHK3 375 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 STOML3Q8TAV4 291 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 RNF141Q8WVD5 230 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 SAV1Q9H4B6 383 aaPredicted RBP16.74■□□□□ 0.27
NDEL1-207ENST00000580012 CLEC5AQ9NY25 188 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 PLA2G2EQ9NZK7 142 aa16.74■□□□□ 0.27
NDEL1-207ENST00000580012 H3BMM0 161 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 NBEAP1P0C6P0 100 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 PSG3Q16557 428 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 KHDC3LQ587J8 217 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 ACTL10Q5JWF8 245 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 BAP18Q8IXM2 172 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 RNF182Q8N6D2 247 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 LRRC20Q8TCA0 184 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 RAB24Q969Q5 203 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 TM2D3Q9BRN9 247 aa16.73■□□□□ 0.27
NDEL1-207ENST00000580012 EIF3GO75821 320 aaKnown RBP eCLIP16.72■□□□□ 0.27
NDEL1-207ENST00000580012 STAG3L2P0CL84 134 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 STAG3L3P0CL85 134 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 HLA-DRB4P13762 266 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 RPL35AP18077 110 aaKnown RBP16.72■□□□□ 0.27
NDEL1-207ENST00000580012 HLA-DMBP28068 263 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 CDC34P49427 236 aaPredicted RBP16.72■□□□□ 0.27
NDEL1-207ENST00000580012 DEFB1P60022 68 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 PQLC2Q6ZP29 291 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 CLUHP3Q96NS8 147 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 ACTR3CQ9C0K3 210 aaPredicted RBP16.72■□□□□ 0.27
NDEL1-207ENST00000580012 HLA-DRB4X5D2U9 266 aa16.72■□□□□ 0.27
NDEL1-207ENST00000580012 GDF5OSQ5U4N7 250 aa16.71■□□□□ 0.27
NDEL1-207ENST00000580012 STHQ8IWL8 128 aa16.71■□□□□ 0.27
NDEL1-207ENST00000580012 A0A0J9YX75 114 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 UBE2CO00762 179 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 OR7C2O60412 319 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 OR10J4P0C629 311 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 TPT1P13693 172 aaKnown RBP16.7■□□□□ 0.26
NDEL1-207ENST00000580012 APOC4P55056 127 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 ZNF726P1Q15940 193 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 AKR1C8PQ5T2L2 129 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 CSTL1Q9H114 145 aa16.7■□□□□ 0.26
NDEL1-207ENST00000580012 A8MTW9 85 aa16.69■□□□□ 0.26
NDEL1-207ENST00000580012 F6UB75 175 aa16.69■□□□□ 0.26
NDEL1-207ENST00000580012 PSG9Q00887 426 aa16.69■□□□□ 0.26
NDEL1-207ENST00000580012 SUN5Q8TC36 379 aa16.69■□□□□ 0.26
NDEL1-207ENST00000580012 HMGB3O15347 200 aaKnown RBP16.68■□□□□ 0.26
NDEL1-207ENST00000580012 GIG44P09565 113 aaPredicted RBP16.68■□□□□ 0.26
NDEL1-207ENST00000580012 EBLN2Q6P2I7 272 aa16.68■□□□□ 0.26
NDEL1-207ENST00000580012 SSX7Q7RTT5 188 aa16.68■□□□□ 0.26
NDEL1-207ENST00000580012 SLC51BQ86UW2 128 aa16.68■□□□□ 0.26
NDEL1-207ENST00000580012 BLNKQ8WV28 456 aa16.68■□□□□ 0.26
NDEL1-207ENST00000580012 MRPL53Q96EL3 112 aaKnown RBP16.68■□□□□ 0.26
NDEL1-207ENST00000580012 HUWE1Q7Z6Z7 4374 aaKnown RBP16.67■□□□□ 0.26
NDEL1-207ENST00000580012 UMAD1C9J7I0 102 aa16.67■□□□□ 0.26
NDEL1-207ENST00000580012 UBE2L3P68036 154 aaKnown RBP16.67■□□□□ 0.26
NDEL1-207ENST00000580012 LYPD1Q8N2G4 141 aa16.67■□□□□ 0.26
NDEL1-207ENST00000580012 ZNF738Q8NE65 137 aa16.67■□□□□ 0.26
NDEL1-207ENST00000580012 RPUSD4Q96CM3 377 aaKnown RBP16.67■□□□□ 0.26
NDEL1-207ENST00000580012 PRELID1Q9Y255 219 aa16.67■□□□□ 0.26
NDEL1-207ENST00000580012 CTXND1A0A1B0GTU2 59 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms