RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 OPCMLQ14982 345 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 PATE2Q6UY27 113 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 LINC00336Q6ZUF6 198 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 OR8I2Q8N0Y5 310 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 SLC25A39Q9BZJ4 359 aaPredicted RBP9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 WDR61Q9GZS3 305 aaKnown RBP9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 ARV1Q9H2C2 271 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 SLC25A32Q9H2D1 315 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 PXMP4Q9Y6I8 212 aa9.04□□□□□ -0.96
SMARCD2-207ENST00000578234 MUC4Q99102 2169 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 PRSS29PA6NIE9 313 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 H3BMM0 161 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 H3BRN7 92 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 IFNA5P01569 189 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 IGKV3-20P01619 116 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 AMBPP02760 352 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 PLP1P60201 277 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 B2MP61769 119 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 Q6ZRG5 221 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 INO80EQ8NBZ0 244 aaPredicted RBP9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 SCGB1C1Q8TD33 95 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 AQP10Q96PS8 301 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 NPCDR1Q9BY65 106 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 SLC39A9Q9NUM3 307 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
SMARCD2-207ENST00000578234 IGLV2-18A0A075B6J9 118 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 ARPC5O15511 151 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 MPDU1O75352 247 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 P0DMU3 169 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 HTN3P15516 51 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 FXYD7P58549 80 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 LINC00305Q7Z4B0 112 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF709Q8N972 641 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 TMEM37Q8WXS4 190 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 NEU1Q99519 415 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 RFNGQ9Y644 331 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 PCLOQ9Y6V0 5065 aa9.02□□□□□ -0.97
SMARCD2-207ENST00000578234 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 SNRPCP09234 159 aaKnown RBP9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 HLA-DRB4P13762 266 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 S100A7P31151 101 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 GCSAMLQ5JQS6 135 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 C1orf194Q5T5A4 169 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 MORN5Q5VZ52 161 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 POM121L12Q8N7R1 296 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 LINC00052Q96N35 136 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 TNFSF18Q9UNG2 199 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 HLA-DRB4X5D2U9 266 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 DNAH6Q9C0G6 4158 aa9.01□□□□□ -0.97
SMARCD2-207ENST00000578234 TRAV5A0A0B4J249 113 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 TMEM189A5PLL7 270 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 SMIM9A6NGZ8 99 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF705FA8MVS1 300 aaPredicted RBP9□□□□□ -0.97
SMARCD2-207ENST00000578234 C17orf112F2Z3M2 114 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF705DP0CH99 300 aaPredicted RBP9□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF705BP0CI00 300 aaPredicted RBP9□□□□□ -0.97
SMARCD2-207ENST00000578234 GALR1P47211 349 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 OR1L4Q8NGR5 311 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 CLUHP3Q96NS8 147 aa9□□□□□ -0.97
SMARCD2-207ENST00000578234 KIAA1109Q2LD37 5005 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 A0A1B0GVG6 124 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 FFAR4Q5NUL3 377 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 SPATA31B1PQ5VZV4 182 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 S100A7AQ86SG5 101 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 HSD17B11Q8NBQ5 300 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 OR11H4Q8NGC9 324 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 PFDN5Q99471 154 aa8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 SAV1Q9H4B6 383 aaPredicted RBP8.99□□□□□ -0.97
SMARCD2-207ENST00000578234 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 H3BTX0 84 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 RPL7P18124 248 aaKnown RBP8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 ID1P41134 155 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 DEFB1P60022 68 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 ZNF266Q14584 549 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 GDF5OSQ5U4N7 250 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 FAM78BQ5VT40 261 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 IGFL4Q6B9Z1 124 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 OR4B1Q8NGF8 309 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 ST6GAL2Q96JF0 529 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 FAM210BQ96KR6 192 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 C16orf92Q96LL3 132 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 KCNIP2Q9NS61 270 aa8.98□□□□□ -0.97
SMARCD2-207ENST00000578234 TEX48A0A1B0GUV7 120 aa8.97□□□□□ -0.97
SMARCD2-207ENST00000578234 EIF3GO75821 320 aaKnown RBP eCLIP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms