RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GLMPQ8WWB7 406 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 HIST1H2BAQ96A08 127 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 SMAD5-AS1Q9Y6J3 95 aa14.17□□□□□ -0.14
PRKCA-203ENST00000578063 SLC25A5P05141 298 aaKnown RBP14.16□□□□□ -0.14
PRKCA-203ENST00000578063 PSG9Q00887 426 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 SRSF2Q01130 221 aaKnown RBP14.16□□□□□ -0.14
PRKCA-203ENST00000578063 PNRC1Q12796 327 aaPredicted RBP14.16□□□□□ -0.14
PRKCA-203ENST00000578063 TM4SF20Q53R12 229 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 CLRN3Q8NCR9 226 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 DPF1Q92782 380 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 TVP23CQ96ET8 276 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 C17orf77Q96MU5 243 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 NAT8Q9UHE5 227 aa14.16□□□□□ -0.14
PRKCA-203ENST00000578063 TSSC4Q9Y5U2 329 aaPredicted RBP14.16□□□□□ -0.14
PRKCA-203ENST00000578063 A0A1B0GUS0 222 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 ZNF785A8K8V0 405 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 SLC17A3O00476 420 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 PEX7O00628 323 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 DEFB136Q30KP8 78 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 OR11H1Q8NG94 326 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 OR1N2Q8NGR9 330 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 C2CD4CQ8TF44 421 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 DERL1Q9BUN8 251 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 AAMDCQ9H7C9 122 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 EPDR1Q9UM22 224 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 M0R036 132 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 SYNJ2BPP57105 145 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 CMTM2Q8TAZ6 248 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 RHPN1-AS1Q9BWJ2 59 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 SMPXQ9UHP9 88 aa14.15□□□□□ -0.14
PRKCA-203ENST00000578063 TMEM213A2RRL7 107 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 AKR1C3P42330 323 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 KLF5Q13887 457 aaPredicted RBP14.14□□□□□ -0.15
PRKCA-203ENST00000578063 TMEM241Q24JQ0 296 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 AWAT1Q58HT5 328 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 EXOC3-AS1Q8N2X6 119 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 C11orf44Q8N8P7 122 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 CITED2Q99967 270 aaPredicted RBP14.14□□□□□ -0.15
PRKCA-203ENST00000578063 ATG101Q9BSB4 218 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 SDF2L1Q9HCN8 221 aa14.14□□□□□ -0.15
PRKCA-203ENST00000578063 HELTA6NFD8 242 aa14.13□□□□□ -0.15
PRKCA-203ENST00000578063 RPL35P42766 123 aaKnown RBP14.13□□□□□ -0.15
PRKCA-203ENST00000578063 CNN1P51911 297 aaKnown RBP14.13□□□□□ -0.15
PRKCA-203ENST00000578063 ATRAIDQ6UW56 229 aa14.13□□□□□ -0.15
PRKCA-203ENST00000578063 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.13□□□□□ -0.15
PRKCA-203ENST00000578063 C8orf86Q6ZUL3 223 aa14.13□□□□□ -0.15
PRKCA-203ENST00000578063 SLC50A1Q9BRV3 221 aa14.13□□□□□ -0.15
PRKCA-203ENST00000578063 C9JCJ5 164 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 CHEK1O14757 476 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 RHEBQ15382 184 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 ZNF331Q9NQX6 463 aaPredicted RBP14.12□□□□□ -0.15
PRKCA-203ENST00000578063 TCRAP04437 139 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 SLURP1P55000 103 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 GNG5P63218 68 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 ARL6IP6Q8N6S5 226 aa14.12□□□□□ -0.15
PRKCA-203ENST00000578063 TAS2R60P59551 318 aa14.11□□□□□ -0.15
PRKCA-203ENST00000578063 TRBV20OR9-2A0A075B6H5 130 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 SCO1O75880 301 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 S100A9P06702 114 aaKnown RBP14.1□□□□□ -0.15
PRKCA-203ENST00000578063 FHL3Q13643 280 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 PEMTQ9UBM1 199 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 RPH3ALQ9UNE2 315 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 LY96Q9Y6Y9 160 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 A0A1W2PRX2 142 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 B4DEV8 164 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 CSN1S1P47710 185 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 GNG4P50150 75 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 RPL23P62829 140 aaKnown RBP14.1□□□□□ -0.15
PRKCA-203ENST00000578063 ADIRFQ15847 76 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 RAX2Q96IS3 184 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 CLEC5AQ9NY25 188 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 PRELID1Q9Y255 219 aa14.1□□□□□ -0.15
PRKCA-203ENST00000578063 SERTM2A0A1B0GWG4 89 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 C7orf77A4D0Y5 90 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 C2orf70A6NJV1 201 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 M0QZ24 198 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 UBE2G1P62253 170 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 TMEM183BQ1AE95 376 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 CENPWQ5EE01 88 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 HIST2H2BDQ6DRA6 164 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 DUX3Q96PT4 197 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 KLF12Q9Y4X4 402 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 MAST4O15021 2626 aa14.09□□□□□ -0.15
PRKCA-203ENST00000578063 K7EQM0 130 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 M0R3E3 92 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 CCL24O00175 119 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 EDN2P20800 178 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 FOXL1Q12952 345 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 LINC01551Q86U37 167 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 OR9G4Q8NGQ1 327 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 FMC1Q96HJ9 113 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 IGF2BP2-AS1Q96M15 143 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 NRN1Q9NPD7 142 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 RPS10P5Q9NQ39 176 aa14.08□□□□□ -0.16
PRKCA-203ENST00000578063 DIRC3C9JPN6 131 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 CBLN1P23435 193 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 SAMD13Q5VXD3 122 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 TCF24Q7RTU0 167 aa14.07□□□□□ -0.16
PRKCA-203ENST00000578063 NIPBLQ6KC79 2804 aaeCLIP14.07□□□□□ -0.167e-6■■□□□ 12.9
PRKCA-203ENST00000578063 RPL11P62913 178 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms