RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 HRH4Q9H3N8 390 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 RBKSQ9H477 322 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 TMEM56-RWDD3S4R434 201 aa4.46□□□□□ -1.7
NUP88-212ENST00000576708 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 C11orf94C9JXX5 98 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 M0R2N4 97 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 BUB3O43684 328 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 IFNA10P01566 189 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 AKAIN1P0CW23 69 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 SULT1A3P0DMM9 295 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 SULT1A4P0DMN0 295 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 AKR1C4P17516 323 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 ALDH3B2P48448 385 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 EMP1P54849 157 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 TCTAP57738 103 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 SUPT4H1P63272 117 aaKnown RBP4.45□□□□□ -1.7
NUP88-212ENST00000576708 ZNF90Q03938 601 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 OR2F1Q13607 317 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 NMSQ5H8A3 153 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 SIGLEC15Q6ZMC9 328 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 GPR141Q7Z602 305 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 C15orf40Q8WUR7 153 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 DIRAS2Q96HU8 199 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 LINC00052Q96N35 136 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 PBDC1Q9BVG4 233 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 NRN1Q9NPD7 142 aa4.45□□□□□ -1.7
NUP88-212ENST00000576708 IGHV3OR16-12A0A075B7B8 117 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 DEFB131BA0A096LNP1 70 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 ANKRD20A5PA0PJZ0 165 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 F6UB75 175 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 CTDSPLO15194 276 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 IAPPP10997 89 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 HLA-DRB4P13762 266 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 EIF2B2P49770 351 aaKnown RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 CAMPP49913 170 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 CNN1P51911 297 aaKnown RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 AP2S1P53680 142 aaPredicted RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 MRPS10P82664 201 aaKnown RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 SSBP1Q04837 148 aaKnown RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 SMCO1Q147U7 214 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 SURF2Q15527 256 aaPredicted RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 LGI3Q8N145 548 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 DYNC2LI1Q8TCX1 351 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 PRRT1Q99946 306 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 MRPS26Q9BYN8 205 aaKnown RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 SLC35B3Q9H1N7 401 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 SAV1Q9H4B6 383 aaPredicted RBP4.44□□□□□ -1.7
NUP88-212ENST00000576708 MCUBQ9NWR8 336 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 HLA-DRB4X5D2U9 266 aa4.44□□□□□ -1.7
NUP88-212ENST00000576708 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 ZFP92A6NM28 416 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 SOCS3O14543 225 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 GSTZ1O43708 216 aaPredicted RBP4.43□□□□□ -1.7
NUP88-212ENST00000576708 PRM2P04554 102 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 PRB4P10163 310 aaPredicted RBP4.43□□□□□ -1.7
NUP88-212ENST00000576708 TNFSF8P32971 234 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
NUP88-212ENST00000576708 CCR6P51684 374 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 CEBPGP53567 150 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 LYZP61626 148 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 SNRPD3P62318 126 aaKnown RBP4.43□□□□□ -1.7
NUP88-212ENST00000576708 ZNF705AQ6ZN79 300 aaPredicted RBP4.43□□□□□ -1.7
NUP88-212ENST00000576708 OR4B1Q8NGF8 309 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 OR1S1Q8NH92 325 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 IL22RA2Q969J5 263 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 SLC35E1Q96K37 410 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 C17orf77Q96MU5 243 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 RNF126Q9BV68 326 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 KCNIP3Q9Y2W7 256 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 U3KQ87 197 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
NUP88-212ENST00000576708 IGLV2-18A0A075B6J9 118 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 IGKV1OR2-108A0A075B7D4 117 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 A0A1B0GVY2 172 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 ZNF705FA8MVS1 300 aaPredicted RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 RTL8CO15255 209 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 PITX3O75364 302 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 AMBPP02760 352 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 ZNF705DP0CH99 300 aaPredicted RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 ZNF705BP0CI00 300 aaPredicted RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 HTN3P15516 51 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 GATA2P23769 480 aaPredicted RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 GPX4P36969 197 aaPredicted RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 AP3S2P59780 193 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 NUTF2P61970 127 aaKnown RBP4.42□□□□□ -1.7
NUP88-212ENST00000576708 FAM78BQ5VT40 261 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 TMED4Q7Z7H5 227 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 NOXA1Q86UR1 476 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 C1orf158Q8N1D5 194 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 CENPSQ8N2Z9 138 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 POM121L12Q8N7R1 296 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 ZNF709Q8N972 641 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 SOSTQ9BQB4 213 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 C1QTNF4Q9BXJ3 329 aa4.42□□□□□ -1.7
NUP88-212ENST00000576708 SLIRPQ9GZT3 109 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms