RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 ZNF709Q8N972 641 aa7.15□□□□□ -1.26
NDE1-210ENST00000574163 THAP6Q8TBB0 222 aa7.15□□□□□ -1.26
NDE1-210ENST00000574163 LINC00052Q96N35 136 aa7.15□□□□□ -1.26
NDE1-210ENST00000574163 SLC50A1Q9BRV3 221 aa7.15□□□□□ -1.26
NDE1-210ENST00000574163 WDR61Q9GZS3 305 aaKnown RBP7.15□□□□□ -1.26
NDE1-210ENST00000574163 TENM2Q9NT68 2774 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 A0A0J9YX75 114 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 C17orf112F2Z3M2 114 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 ZNF253O75346 499 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 GUK1Q16774 197 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 EBLN2Q6P2I7 272 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 AQP10Q96PS8 301 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 HRH4Q9H3N8 390 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 CLEC5AQ9NY25 188 aa7.14□□□□□ -1.27
NDE1-210ENST00000574163 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 ZNF705EA8MWA4 302 aaPredicted RBP7.13□□□□□ -1.27
NDE1-210ENST00000574163 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 IFNA5P01569 189 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 IGLC2P0DOY2 106 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 MORN5Q5VZ52 161 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 OR11H2Q8NH07 326 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 C20orf173Q96LM9 149 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 RARRES2Q99969 163 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 MRPL32Q9BYC8 188 aaKnown RBP7.13□□□□□ -1.27
NDE1-210ENST00000574163 ZNF331Q9NQX6 463 aaPredicted RBP7.13□□□□□ -1.27
NDE1-210ENST00000574163 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
NDE1-210ENST00000574163 CSMD3Q7Z407 3707 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 A0A0J9YWU9 116 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 DUSP14O95147 198 aaKnown RBP7.12□□□□□ -1.27
NDE1-210ENST00000574163 AMBPP02760 352 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 MIFP14174 115 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 PDE6HQ13956 83 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 ZNF266Q14584 549 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 CSNK1G2-AS1Q8NCQ2 148 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 ZNF738Q8NE65 137 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 LRRC20Q8TCA0 184 aa7.12□□□□□ -1.27
NDE1-210ENST00000574163 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
NDE1-210ENST00000574163 HIST1H1EP10412 219 aaKnown RBP7.11□□□□□ -1.27
NDE1-210ENST00000574163 PSG9Q00887 426 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 PSG3Q16557 428 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 FAM78BQ5VT40 261 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 AMTNQ6UX39 209 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 Q8NAQ8 132 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 SCGB1C1Q8TD33 95 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 MRPL53Q96EL3 112 aaKnown RBP7.11□□□□□ -1.27
NDE1-210ENST00000574163 SAT2Q96F10 170 aaPredicted RBP7.11□□□□□ -1.27
NDE1-210ENST00000574163 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
NDE1-210ENST00000574163 F6UB75 175 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 H3BQ15 152 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 SLC17A3O00476 420 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 CNN1P51911 297 aaKnown RBP7.1□□□□□ -1.27
NDE1-210ENST00000574163 DEFB1P60022 68 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 GCSAMLQ5JQS6 135 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 FFAR4Q5NUL3 377 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 ZNF705AQ6ZN79 300 aaPredicted RBP7.1□□□□□ -1.27
NDE1-210ENST00000574163 OR4B1Q8NGF8 309 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 OR8A1Q8NGG7 326 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 OR2T35Q8NGX2 323 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 RPUSD4Q96CM3 377 aaKnown RBP7.1□□□□□ -1.27
NDE1-210ENST00000574163 FAM167A-AS1Q96KT0 104 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 NEU1Q99519 415 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 SMIM3Q9BZL3 60 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 WFDC1Q9HC57 220 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 FUT9Q9Y231 359 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 PRELID1Q9Y255 219 aa7.1□□□□□ -1.27
NDE1-210ENST00000574163 TRBV19A0A075B6N1 114 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 FXYD6-FXYD2A0A087WZ82 144 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 TRAV5A0A0B4J249 113 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 IGHV4-28A0A0C4DH34 117 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 SMIM9A6NGZ8 99 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 ZNF705FA8MVS1 300 aaPredicted RBP7.09□□□□□ -1.27
NDE1-210ENST00000574163 BOLA2-SMG1P6H3BVE0 249 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 IGKV3-20P01619 116 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 ZNF705DP0CH99 300 aaPredicted RBP7.09□□□□□ -1.27
NDE1-210ENST00000574163 ZNF705BP0CI00 300 aaPredicted RBP7.09□□□□□ -1.27
NDE1-210ENST00000574163 TAS2R45P59539 299 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 RHOBP62745 196 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 KHDC3LQ587J8 217 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 IGFL4Q6B9Z1 124 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 INO80EQ8NBZ0 244 aaPredicted RBP7.09□□□□□ -1.27
NDE1-210ENST00000574163 OR2G3Q8NGZ4 309 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 PSMG3Q9BT73 122 aaPredicted RBP7.09□□□□□ -1.27
NDE1-210ENST00000574163 SLC25A2Q9BXI2 301 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 MFFQ9GZY8 342 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 ZNF586Q9NXT0 402 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 TNFSF18Q9UNG2 199 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 X6R8D5 127 aa7.09□□□□□ -1.27
NDE1-210ENST00000574163 STARD9Q9P2P6 4700 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 RNF222A6NCQ9 220 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 NUPR2A6NF83 97 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 G3V3Q6 166 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 INSP01308 110 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 M6PRP20645 277 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
NDE1-210ENST00000574163 HIST1H1AQ02539 215 aaPredicted RBP7.08□□□□□ -1.28
NDE1-210ENST00000574163 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9530.4 ms