RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STX12Q86Y82 276 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 TMEM37Q8WXS4 190 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 NMES1Q9C002 83 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 DNAH17Q9UFH2 4485 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 FAT2Q9NYQ8 4349 aa12.41□□□□□ -0.42
SMG6-212ENST00000573153 INMT-MINDY4F8WBC2 141 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 DUSP14O95147 198 aaKnown RBP12.4□□□□□ -0.42
SMG6-212ENST00000573153 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 CXCL3P19876 107 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 ATP6V1FQ16864 119 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 LINC00305Q7Z4B0 112 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 C2CD4CQ8TF44 421 aa12.4□□□□□ -0.42
SMG6-212ENST00000573153 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 COX7A2P2O60397 106 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 AMBPP02760 352 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 RPL29P47914 159 aaKnown RBP12.39□□□□□ -0.43
SMG6-212ENST00000573153 DEFA1P59665 94 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 DEFA3P59666 94 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
SMG6-212ENST00000573153 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
SMG6-212ENST00000573153 MPDU1O75352 247 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 CNN1P51911 297 aaKnown RBP12.38□□□□□ -0.43
SMG6-212ENST00000573153 CYCSP99999 105 aaKnown RBP12.38□□□□□ -0.43
SMG6-212ENST00000573153 OPCMLQ14982 345 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 C10orf113Q5VZT2 155 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 LCN15Q6UWW0 184 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 Q6ZRG5 221 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 BPIFA4PQ86YQ2 179 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 DNAJC4Q9NNZ3 241 aa12.38□□□□□ -0.43
SMG6-212ENST00000573153 HERC2O95714 4834 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 E5RGE8 158 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 FGL1Q08830 312 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 PSG3Q16557 428 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 MIC13Q5XKP0 118 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 PFDN5Q99471 154 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 SLC50A1Q9BRV3 221 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 ZNF331Q9NQX6 463 aaPredicted RBP12.37□□□□□ -0.43
SMG6-212ENST00000573153 GOLT1BQ9Y3E0 138 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
SMG6-212ENST00000573153 TRAV10A0A0B4J240 114 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 SIX6O95475 246 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 RLN2P04090 185 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 MORN5Q5VZ52 161 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 ZNF738Q8NE65 137 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 OR8A1Q8NGG7 326 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
SMG6-212ENST00000573153 TEX48A0A1B0GUV7 120 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 IGLL5B9A064 214 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 H0YIZ8 118 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 H2BFSP57053 126 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 B2MP61769 119 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 BAXQ07812 192 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 SLC25A31Q9H0C2 315 aa12.35□□□□□ -0.43
SMG6-212ENST00000573153 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
SMG6-212ENST00000573153 GUK1Q16774 197 aa12.34□□□□□ -0.43
SMG6-212ENST00000573153 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
SMG6-212ENST00000573153 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
SMG6-212ENST00000573153 OR5AC2Q9NZP5 309 aa12.34□□□□□ -0.43
SMG6-212ENST00000573153 PXMP4Q9Y6I8 212 aa12.34□□□□□ -0.43
SMG6-212ENST00000573153 BOLA2-SMG1P6H3BVE0 249 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 ZNF253O75346 499 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 INSP01308 110 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 SPART-AS1P0CW21 52 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 FGF7P21781 194 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 NHLH2Q02577 135 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.44
SMG6-212ENST00000573153 RNF126Q9BV68 326 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 NPCDR1Q9BY65 106 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
SMG6-212ENST00000573153 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 H3BQ15 152 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 SLC17A3O00476 420 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 HBE1P02100 147 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 PRB4P10163 310 aaPredicted RBP12.32□□□□□ -0.44
SMG6-212ENST00000573153 OXA1LQ15070 435 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 OR5C1Q8NGR4 320 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 PPP1R1CQ8WVI7 109 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 TMEM14CQ9P0S9 112 aa12.32□□□□□ -0.44
SMG6-212ENST00000573153 M0R2Z0 102 aa12.31□□□□□ -0.44
SMG6-212ENST00000573153 PRM2P04554 102 aa12.31□□□□□ -0.44
SMG6-212ENST00000573153 TSPOP30536 169 aa12.31□□□□□ -0.44
SMG6-212ENST00000573153 HIST1H1AQ02539 215 aaPredicted RBP12.31□□□□□ -0.44
SMG6-212ENST00000573153 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
SMG6-212ENST00000573153 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
SMG6-212ENST00000573153 DYNC1H1Q14204 4646 aaKnown RBP12.3□□□□□ -0.44
SMG6-212ENST00000573153 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 LOC102723971A0A1B0GUV8 181 aa12.3□□□□□ -0.44
SMG6-212ENST00000573153 SSNA1O43805 119 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms