RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 AMTNQ6UX39 209 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 TMEM182Q6ZP80 229 aaPredicted RBP6.96□□□□□ -1.3
CIITA-207ENST00000571545 Q6ZRG5 221 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 LINC00299Q6ZSB3 139 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 ZNF767PQ75MW2 155 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 C1orf158Q8N1D5 194 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 OR11H7Q8NGC8 314 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 UHRF2Q96PU4 802 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 SDHCQ99643 169 aaPredicted RBP6.96□□□□□ -1.3
CIITA-207ENST00000571545 C20orf144Q9BQM9 153 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 CCDC32Q9BV29 185 aa6.96□□□□□ -1.3
CIITA-207ENST00000571545 C7orf66A4D0T2 115 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 C5orf51A6NDU8 294 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 AGPAT2O15120 278 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 MBPP02686 304 aaPredicted RBP6.95□□□□□ -1.3
CIITA-207ENST00000571545 TCRBP04435 133 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 CDKN1BP46527 198 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 BCAP31P51572 246 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 CAV2P51636 162 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 FAM3BP58499 235 aaPredicted RBP6.95□□□□□ -1.3
CIITA-207ENST00000571545 HIST1H1AQ02539 215 aaPredicted RBP6.95□□□□□ -1.3
CIITA-207ENST00000571545 SLC38A11Q08AI6 406 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 PSG3Q16557 428 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 GUK1Q16774 197 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 SPINK13Q1W4C9 94 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 RNF212Q495C1 297 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 GSG1LQ6UXU4 331 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 LINC00305Q7Z4B0 112 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 STX12Q86Y82 276 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 OR8A1Q8NGG7 326 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 OR1L4Q8NGR5 311 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 ZNF431Q8TF32 576 aaPredicted RBP6.95□□□□□ -1.3
CIITA-207ENST00000571545 PFDN5Q99471 154 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 NUDT15Q9NV35 164 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
CIITA-207ENST00000571545 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
CIITA-207ENST00000571545 TRAV8-2A0A0B4J237 113 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 FAM25EA8MYX2 175 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 M0R2Z0 102 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 TAS2R60P59551 318 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 LGALS9BQ3B8N2 356 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 SOHLH1Q5JUK2 328 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 C10orf113Q5VZT2 155 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 MZT2BQ6NZ67 158 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 C12orf45Q8N5I9 185 aaPredicted RBP6.94□□□□□ -1.3
CIITA-207ENST00000571545 RNF182Q8N6D2 247 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 RPUSD4Q96CM3 377 aaKnown RBP6.94□□□□□ -1.3
CIITA-207ENST00000571545 C16orf74Q96GX8 76 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 C2orf50Q96LR7 162 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 UQCC1Q9NVA1 299 aa6.94□□□□□ -1.3
CIITA-207ENST00000571545 MPDU1O75352 247 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 CCNKO75909 580 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 HTN3P15516 51 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 S100A11P31949 105 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 CAMLGP49069 296 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 BAP18Q8IXM2 172 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 S100ZQ8WXG8 99 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 C17orf77Q96MU5 243 aa6.93□□□□□ -1.3
CIITA-207ENST00000571545 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
CIITA-207ENST00000571545 LYRM2Q9NU23 88 aaPredicted RBP6.93□□□□□ -1.3
CIITA-207ENST00000571545 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
CIITA-207ENST00000571545 TRAV6A0A075B6T7 132 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 FAM240BA0A1B0GVZ2 78 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 H7BYZ3 331 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 CCSO14618 274 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 PLA2G10O15496 165 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 CRXO43186 299 aaPredicted RBP6.92□□□□□ -1.3
CIITA-207ENST00000571545 ZNF253O75346 499 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 ATP5G1P05496 136 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 ATP5G3P48201 142 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 SULT1A1P50225 295 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 S100A10P60903 97 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 ATP6V1FQ16864 119 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 PATE2Q6UY27 113 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 NRARPQ7Z6K4 114 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 TMEM263Q8WUH6 116 aaKnown RBP6.92□□□□□ -1.3
CIITA-207ENST00000571545 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 LINC01587Q99440 93 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 MGST2Q99735 147 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 GPN1Q9HCN4 374 aaPredicted RBP6.92□□□□□ -1.3
CIITA-207ENST00000571545 DNAJC4Q9NNZ3 241 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 KCNIP2Q9NS61 270 aa6.92□□□□□ -1.3
CIITA-207ENST00000571545 TIMM8BQ9Y5J9 83 aaPredicted RBP6.92□□□□□ -1.3
CIITA-207ENST00000571545 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 ZNF705GA8MUZ8 300 aaPredicted RBP6.91□□□□□ -1.3
CIITA-207ENST00000571545 MRPS12O15235 138 aaKnown RBP6.91□□□□□ -1.3
CIITA-207ENST00000571545 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 RPL29P47914 159 aaKnown RBP6.91□□□□□ -1.3
CIITA-207ENST00000571545 BAXQ07812 192 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 VWC2Q2TAL6 325 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 TMEM88Q6PEY1 159 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 CHAC2Q8WUX2 184 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 MRPL53Q96EL3 112 aaKnown RBP6.91□□□□□ -1.3
CIITA-207ENST00000571545 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 WDR83OSQ9Y284 106 aa6.91□□□□□ -1.3
CIITA-207ENST00000571545 UBE2L5PA0A1B0GUS4 154 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms