RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ATF4P18848 351 aaPredicted RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 CXCL2P19875 107 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ATP6V0CP27449 155 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 APOC4P55056 127 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 CMC4P56277 68 aaPredicted RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 RAB2AP61019 212 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 SNRPD3P62318 126 aaKnown RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 FFAR4Q5NUL3 377 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 AMTNQ6UX39 209 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 STHQ8IWL8 128 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 KIR2DL5AQ8N109 375 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ZNF709Q8N972 641 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 HSD17B11Q8NBQ5 300 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 CSNK1G2-AS1Q8NCQ2 148 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 OR1L4Q8NGR5 311 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 KIR2DL5BQ8NHK3 375 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 GATAD1Q8WUU5 269 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ASB13Q8WXK3 278 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 RNF183Q96D59 192 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 GPR82Q96P67 336 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 ZNF331Q9NQX6 463 aaPredicted RBP5.09□□□□□ -1.59
SMG6-209ENST00000571442 PLA2G2EQ9NZK7 142 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 PFDN2Q9UHV9 154 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 HLA-DRB4X5D2U9 266 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.59
SMG6-209ENST00000571442 SACSQ9NZJ4 4579 aa5.09□□□□□ -1.6
SMG6-209ENST00000571442 A0A0J9YX75 114 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 A8MTW9 85 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 SPRY2O43597 315 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 IFNA5P01569 189 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 ID1P41134 155 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 MEOX2P50222 304 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 FOXI2Q6ZQN5 318 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 Q6ZWC4 215 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 SSX7Q7RTT5 188 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 BPIFA4PQ86YQ2 179 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 SCGB1C1Q8TD33 95 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 FXYD5Q96DB9 178 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 PFDN5Q99471 154 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 SLC35B3Q9H1N7 401 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 HRH4Q9H3N8 390 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 FUT9Q9Y231 359 aa5.08□□□□□ -1.6
SMG6-209ENST00000571442 TRBV19A0A075B6N1 114 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 C3orf84H3BNL1 204 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 M0R3E3 92 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 UBE2CO00762 179 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 DEFB4AO15263 64 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 HMGB3O15347 200 aaKnown RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 CRXO43186 299 aaPredicted RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 OR10J4P0C629 311 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 RBMY1A1P0DJD3 496 aaKnown RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 RBMY1CP0DJD4 496 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 HIST1H1EP10412 219 aaKnown RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 CNN1P51911 297 aaKnown RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 KIR3DS1Q14943 382 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 RBMY1FQ15415 496 aaKnown RBP5.07□□□□□ -1.6
SMG6-209ENST00000571442 ZNF726P1Q15940 193 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 PSG3Q16557 428 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 FAM122CQ6P4D5 195 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 LCN15Q6UWW0 184 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 EXOC3-AS1Q8N2X6 119 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 ZNF738Q8NE65 137 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 OR4B1Q8NGF8 309 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 BLNKQ8WV28 456 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 PHYHIPLQ96FC7 376 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 MFFQ9GZY8 342 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 RPRMQ9NS64 109 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 TMEM14CQ9P0S9 112 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 TIMM9Q9Y5J7 89 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 X6R8D5 127 aa5.07□□□□□ -1.6
SMG6-209ENST00000571442 A0A0J9YWU9 116 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 M0R2Z0 102 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 PRM2P04554 102 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 SPP1P10451 314 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 M6PRP20645 277 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 S100A7P31151 101 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 ZNF266Q14584 549 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 MORN3Q6PF18 240 aaPredicted RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 C1orf158Q8N1D5 194 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 RPP25LQ8N5L8 163 aaKnown RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 Q8NAQ8 132 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 INO80EQ8NBZ0 244 aaPredicted RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 OR8A1Q8NGG7 326 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 OR2G3Q8NGZ4 309 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 OR11H2Q8NH07 326 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 RNF141Q8WVD5 230 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 RPUSD4Q96CM3 377 aaKnown RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 SLC50A1Q9BRV3 221 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 PSMG3Q9BT73 122 aaPredicted RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 PAXXQ9BUH6 204 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 MRPL32Q9BYC8 188 aaKnown RBP5.06□□□□□ -1.6
SMG6-209ENST00000571442 OR51M1Q9H341 326 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 KCNIP2Q9NS61 270 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 TP53TG1Q9Y2A0 90 aa5.06□□□□□ -1.6
SMG6-209ENST00000571442 TRAV12-2A0A075B6T6 113 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 HMSDA8MTL9 139 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms