RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 MPDU1O75352 247 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 RBMY1A1P0DJD3 496 aaKnown RBP9.71□□□□□ -0.86
RPAIN-207ENST00000570883 RBMY1CP0DJD4 496 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 IGLC2P0DOY2 106 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 NUTF2P61970 127 aaKnown RBP9.71□□□□□ -0.86
RPAIN-207ENST00000570883 RBMY1FQ15415 496 aaKnown RBP9.71□□□□□ -0.86
RPAIN-207ENST00000570883 GCSAMLQ5JQS6 135 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 SPATA31B1PQ5VZV4 182 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 AMTNQ6UX39 209 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 Q6ZRG5 221 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 OR11H7Q8NGC8 314 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 OR4B1Q8NGF8 309 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 C1QTNF4Q9BXJ3 329 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 HSPB11Q9Y547 144 aa9.71□□□□□ -0.86
RPAIN-207ENST00000570883 CXorf65A6NEN9 183 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 H3BQ15 152 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 H3BTX0 84 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 SLC17A3O00476 420 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF705DP0CH99 300 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF705BP0CI00 300 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-207ENST00000570883 PET100P0DJ07 73 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 PRB4P10163 310 aaPredicted RBP9.7□□□□□ -0.86
RPAIN-207ENST00000570883 FCN2Q15485 313 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 BPIFA4PQ86YQ2 179 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 OR1L4Q8NGR5 311 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 WDR61Q9GZS3 305 aaKnown RBP9.7□□□□□ -0.86
RPAIN-207ENST00000570883 RNF24Q9Y225 148 aa9.7□□□□□ -0.86
RPAIN-207ENST00000570883 LCE6AA0A183 80 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 MIFP14174 115 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 CXCL2P19875 107 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 CNN1P51911 297 aaKnown RBP9.69□□□□□ -0.86
RPAIN-207ENST00000570883 PSG9Q00887 426 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 LCN15Q6UWW0 184 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF705AQ6ZN79 300 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF738Q8NE65 137 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 PFDN5Q99471 154 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 ATP5SQ99766 215 aa9.69□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF331Q9NQX6 463 aaPredicted RBP9.69□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF705FA8MVS1 300 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-207ENST00000570883 RPL12P30050 165 aaKnown RBP9.68□□□□□ -0.86
RPAIN-207ENST00000570883 NANOS2P60321 138 aaKnown RBP9.68□□□□□ -0.86
RPAIN-207ENST00000570883 PSG3Q16557 428 aa9.68□□□□□ -0.86
RPAIN-207ENST00000570883 SAT2Q96F10 170 aaPredicted RBP9.68□□□□□ -0.86
RPAIN-207ENST00000570883 SMIM3Q9BZL3 60 aa9.68□□□□□ -0.86
RPAIN-207ENST00000570883 MFFQ9GZY8 342 aa9.68□□□□□ -0.86
RPAIN-207ENST00000570883 MED28Q9H204 178 aa9.68□□□□□ -0.86
RPAIN-207ENST00000570883 HRH4Q9H3N8 390 aa9.68□□□□□ -0.86
RPAIN-207ENST00000570883 C11orf45Q8TAV5 145 aa9.67□□□□□ -0.86
RPAIN-207ENST00000570883 LRRC20Q8TCA0 184 aa9.67□□□□□ -0.86
RPAIN-207ENST00000570883 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
RPAIN-207ENST00000570883 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
RPAIN-207ENST00000570883 ZNF586Q9NXT0 402 aa9.67□□□□□ -0.86
RPAIN-207ENST00000570883 NUPR2A6NF83 97 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 M0R2Z0 102 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 DUSP14O95147 198 aaKnown RBP9.66□□□□□ -0.86
RPAIN-207ENST00000570883 PYYP10082 97 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 HIST1H1AQ02539 215 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-207ENST00000570883 OXA1LQ15070 435 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 RGS21Q2M5E4 152 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 Q5BKY6 102 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 CEMP1Q6PRD7 247 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-207ENST00000570883 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 C1orf158Q8N1D5 194 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 OR8A1Q8NGG7 326 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 PHLDA1Q8WV24 401 aaPredicted RBP9.66□□□□□ -0.86
RPAIN-207ENST00000570883 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
RPAIN-207ENST00000570883 FAM167A-AS1Q96KT0 104 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
RPAIN-207ENST00000570883 PRAC2D3DTV9 90 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 CRXO43186 299 aaPredicted RBP9.65□□□□□ -0.86
RPAIN-207ENST00000570883 NDUFB4O95168 129 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 SPINK13Q1W4C9 94 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 NEU1Q99519 415 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 KCNIP2Q9NS61 270 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 RFNGQ9Y644 331 aa9.65□□□□□ -0.86
RPAIN-207ENST00000570883 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 ZNF253O75346 499 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 GIPP09681 153 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-207ENST00000570883 GUK1Q16774 197 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 BAP18Q8IXM2 172 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 IGF2BP2-AS1Q96M15 143 aa9.64□□□□□ -0.87
RPAIN-207ENST00000570883 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
RPAIN-207ENST00000570883 BOLA2-SMG1P6H3BVE0 249 aa9.63□□□□□ -0.87
RPAIN-207ENST00000570883 MRPL32Q9BYC8 188 aaKnown RBP9.63□□□□□ -0.87
RPAIN-207ENST00000570883 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-207ENST00000570883 GOLT1BQ9Y3E0 138 aa9.63□□□□□ -0.87
RPAIN-207ENST00000570883 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
RPAIN-207ENST00000570883 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 SMIM9A6NGZ8 99 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 M0R3E3 92 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 INSP01308 110 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 IFNA5P01569 189 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 AMBPP02760 352 aa9.62□□□□□ -0.87
RPAIN-207ENST00000570883 HIST1H1EP10412 219 aaKnown RBP9.62□□□□□ -0.87
RPAIN-207ENST00000570883 RHOBP62745 196 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms