RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	TMEM144	Q7Z5S9	345 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	RNF182	Q8N6D2	247 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	ZNF709	Q8N972	641 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	C15orf53	Q8NAA6	179 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	C20orf173	Q96LM9	149 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	SCRT1	Q9BWW7	348 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	ARL6	Q9H0F7	186 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	NPVF	Q9HCQ7	196 aa		6.09	□□□□□ -1.43
SCAPER-223	ENST00000569784	DNAH1	Q9P2D7	4330 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	TRAV12-2	A0A075B6T6	113 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	IGKV1OR2-108	A0A075B7D4	117 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	C9orf170	A2RU37	121 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	LYRM9	A8MSI8	78 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	BOLA2-SMG1P6	H3BVE0	249 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	COX7A2P2	O60397	106 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	ADAP1	O75689	374 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	METTL15P1	P0C7V9	234 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	RAB31	Q13636	194 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	IAH1	Q2TAA2	248 aa	Predicted RBP	6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	LGALS9B	Q3B8N2	356 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	RNF212	Q495C1	297 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	C1orf134	Q5TEV5	83 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	TEPP	Q6URK8	271 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	CCDC190	Q86UF4	302 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	CCDC28A	Q8IWP9	274 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	BAP18	Q8IXM2	172 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	C1orf158	Q8N1D5	194 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	TMEM256	Q8N2U0	113 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR11H7	Q8NGC8	314 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	TRIM63	Q969Q1	353 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	SOST	Q9BQB4	213 aa		6.08	□□□□□ -1.44
SCAPER-223	ENST00000569784	FAM25E	A8MYX2	175 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784		H3BRN7	92 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	ATP5G1	P05496	136 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR4E1	P0C645	316 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	ATP5G3	P48201	142 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	CCL18	P55774	89 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	ZNF546	Q86UE3	836 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR10J6P	Q8NGY7	276 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	C16orf74	Q96GX8	76 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	UHRF2	Q96PU4	802 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	SHANK2-AS3	Q9BTD1	123 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	ARV1	Q9H2C2	271 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784		V9GYH0	126 aa		6.07	□□□□□ -1.44
SCAPER-223	ENST00000569784	C5orf51	A6NDU8	294 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784		J3KRW8	73 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	ZNF561-AS1	K7EIQ3	104 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	NDUFB6	O95139	128 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	PVALB	P20472	110 aa	Predicted RBP	6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	TSPO	P30536	169 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	DLK1	P80370	383 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	SLC38A11	Q08AI6	406 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	PSG3	Q16557	428 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	PXDC1	Q5TGL8	231 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	LCN15	Q6UWW0	184 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784		Q6ZRG5	221 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	LINC00305	Q7Z4B0	112 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	BPIFA4P	Q86YQ2	179 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR8A1	Q8NGG7	326 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	RPUSD4	Q96CM3	377 aa	Known RBP	6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	SMIM8	Q96KF7	97 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	SLC50A1	Q9BRV3	221 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	FLVCR2	Q9UPI3	526 aa		6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	LSM5	Q9Y4Y9	91 aa	Known RBP	6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.06	□□□□□ -1.44
SCAPER-223	ENST00000569784	PMS2P5	A8MQ11	134 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	SNURFL	B1AK76	121 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	PRSS46	E5RG02	174 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	TSC22D2	O75157	780 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	SNRPC	P09234	159 aa	Known RBP	6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	CDKN1B	P46527	198 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	CAV2	P51636	162 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	FAM3B	P58499	235 aa	Predicted RBP	6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	TAS2R60	P59551	318 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR5I1	Q13606	314 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	FCN2	Q15485	313 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	CNPY1	Q3B7I2	92 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	C10orf113	Q5VZT2	155 aa		6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784	RCL1	Q9Y2P8	373 aa	Known RBP	6.05	□□□□□ -1.44
SCAPER-223	ENST00000569784		A0A087X0K7	114 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	TRAV8-2	A0A0B4J237	113 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	CBY3	A6NI87	242 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	AGPAT2	O15120	278 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	RTL8C	O15255	209 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	CCNK	O75909	580 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	RLN2	P04090	185 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	PRM2	P04554	102 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	PRB4	P10163	310 aa	Predicted RBP	6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	CXCL2	P19875	107 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	CXCL3	P19876	107 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	TAS2R30	P59541	319 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	AMTN	Q6UX39	209 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	C12orf45	Q8N5I9	185 aa	Predicted RBP	6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	SYT8	Q8NBV8	401 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	OR1L4	Q8NGR5	311 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	SRR	Q9GZT4	340 aa		6.04	□□□□□ -1.44
SCAPER-223	ENST00000569784	NOP10	Q9NPE3	64 aa	Known RBP	6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms