RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PATE4P0C8F1 98 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 HGFACQ04756 655 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 Q499Y3 187 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 ZNF627Q7L945 461 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 LY6G5BQ8NDX9 201 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 FAM213BQ8TBF2 198 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 LINC01587Q99440 93 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 SAMD10Q9BYL1 202 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 NABP1Q96AH0 204 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 ADAT3Q96EY9 351 aaPredicted RBP5.31□□□□□ -1.56
SMG1-217ENST00000569764 AGMATQ9BSE5 352 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 IGLV3-9A0A075B6K5 115 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 A6NDN8 102 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 G3V3Q6 166 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 OR9G9P0C7N8 305 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 IFITM1P13164 125 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
SMG1-217ENST00000569764 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 GAGE2EQ4V326 116 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 C9orf153Q5TBE3 101 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 MAPK1IP1LQ8NDC0 245 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 TAS2R4Q9NYW5 299 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 EHFQ9NZC4 300 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 GAGE2DQ9UEU5 116 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 F11RQ9Y624 299 aaKnown RBP5.31□□□□□ -1.56
SMG1-217ENST00000569764 LINC00312Q9Y6C7 94 aa5.31□□□□□ -1.56
SMG1-217ENST00000569764 GRIFINA4D1Z8 144 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 SRRM5B3KS81 715 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 GPR137BO60478 399 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 IGLC1P0CG04 106 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 INAFM2P0DMQ5 153 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 MPV17P39210 176 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 RND2P52198 227 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 ARL16Q0P5N6 197 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 PAPPA-AS1Q5QFB9 102 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 Q8TCH9 128 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 NPVFQ9HCQ7 196 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 PXMP4Q9Y6I8 212 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 LYRM9A8MSI8 78 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 PFN2P35080 140 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 NDUFV3P56181 108 aaKnown RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 CENPWQ5EE01 88 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 UBE2NLQ5JXB2 153 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 LYZL4Q96KX0 146 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 COMMD5Q9GZQ3 224 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 V9GY05 133 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 MEIS3P1A6NDR6 274 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 SNURFLB1AK76 121 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 RNASE1P07998 156 aaKnown RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 OR5AL1P0C617 328 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 CNTFRP26992 372 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 ZNF93P35789 620 aaPredicted RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 PPP1CCP36873 323 aaKnown RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 AADACL3Q5VUY0 350 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 FXYD5Q96DB9 178 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 SLC25A33Q9BSK2 321 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 ZNF747Q9BV97 191 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 MTFP1Q9UDX5 166 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 FUT9Q9Y231 359 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 HEATR1Q9H583 2144 aaKnown RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 A0A1W2PS18 150 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 C15orf61A6NNL5 157 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 K7N7A8 449 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 GPX1P07203 203 aa5.3□□□□□ -1.56
SMG1-217ENST00000569764 NHLRC4P0CG21 123 aaPredicted RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 PAQR4Q8N4S7 273 aaPredicted RBP5.3□□□□□ -1.56
SMG1-217ENST00000569764 LOC107986453A0A1B0GWG9 222 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 ISLRO14498 428 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 ERHP84090 104 aaKnown RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 SRSF3P84103 164 aaKnown RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 TFF3Q07654 80 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 ZNF726P1Q15940 193 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 PRRC2AP48634 2157 aaKnown RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 KNCNA6PVL3 124 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 MYCNOSP40205 109 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 SLC25A34Q6PIV7 304 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 IL1F10Q8WWZ1 152 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 C9orf85Q96MD7 179 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 ZNF581Q9P0T4 197 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 MRPS16Q9Y3D3 137 aaKnown RBP5.29□□□□□ -1.56
SMG1-217ENST00000569764 TMEM272A0A1B0GTI8 110 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 A0A1W2PP11 408 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 H3BUX3 64 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 SYNGR1O43759 233 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 FABP2P12104 132 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 CRYBB3P26998 211 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 LCN12Q6JVE5 192 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 NDUFA11Q86Y39 141 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 DDB2Q92466 427 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 HS3ST6Q96QI5 342 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 SPIN2AQ99865 258 aa5.29□□□□□ -1.56
SMG1-217ENST00000569764 SPIN2BQ9BPZ2 258 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms