RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 THAP6Q8TBB0 222 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 HSPB11Q9Y547 144 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 DUSP14O95147 198 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 MIFP14174 115 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 PSG9Q00887 426 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 FCN2Q15485 313 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 PSG3Q16557 428 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 RGS21Q2M5E4 152 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 ZNF709Q8N972 641 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 ATP5SQ99766 215 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-218ENST00000569569 TRAV5A0A0B4J249 113 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 A8MTW9 85 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 C17orf112F2Z3M2 114 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 FXYD7P58549 80 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 Q8NAQ8 132 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 OR11H7Q8NGC8 314 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 SLC35B3Q9H1N7 401 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 HRH4Q9H3N8 390 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF331Q9NQX6 463 aaPredicted RBP10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 KCNIP2Q9NS61 270 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 X6R8D5 127 aa10.02□□□□□ -0.81
HERPUD1-218ENST00000569569 CXorf65A6NEN9 183 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 DEFB4AO15263 64 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 SNRPCP09234 159 aaKnown RBP10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 IGLC2P0DOY2 106 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 GUK1Q16774 197 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 ASB13Q8WXK3 278 aa10.01□□□□□ -0.81
HERPUD1-218ENST00000569569 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 H3BQ15 152 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 IFNA5P01569 189 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 RBMY1A1P0DJD3 496 aaKnown RBP10□□□□□ -0.81
HERPUD1-218ENST00000569569 RBMY1CP0DJD4 496 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
HERPUD1-218ENST00000569569 PMS2P11Q13670 270 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 RBMY1FQ15415 496 aaKnown RBP10□□□□□ -0.81
HERPUD1-218ENST00000569569 GCSAMLQ5JQS6 135 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 AMTNQ6UX39 209 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF705AQ6ZN79 300 aaPredicted RBP10□□□□□ -0.81
HERPUD1-218ENST00000569569 C11orf45Q8TAV5 145 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 SCGB1C1Q8TD33 95 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 SAT2Q96F10 170 aaPredicted RBP10□□□□□ -0.81
HERPUD1-218ENST00000569569 NEU1Q99519 415 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 SMIM3Q9BZL3 60 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 MFFQ9GZY8 342 aa10□□□□□ -0.81
HERPUD1-218ENST00000569569 NUPR2A6NF83 97 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 H3BTX0 84 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 AMBPP02760 352 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF705DP0CH99 300 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF705BP0CI00 300 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 OXA1LQ15070 435 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 OR8A1Q8NGG7 326 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 RPUSD4Q96CM3 377 aaKnown RBP9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 LYSTQ99698 3801 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 PARD6GQ9BYG4 376 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF586Q9NXT0 402 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
HERPUD1-218ENST00000569569 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF705FA8MVS1 300 aaPredicted RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 SLC17A3O00476 420 aa9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 ZNF253O75346 499 aa9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 GIPP09681 153 aaPredicted RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 CEMP1Q6PRD7 247 aaPredicted RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 MRPL32Q9BYC8 188 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
HERPUD1-218ENST00000569569 TRBV19A0A075B6N1 114 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 NANOS2P60321 138 aaKnown RBP9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 RHOBP62745 196 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 PDE6HQ13956 83 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 IGF2BP2-AS1Q96M15 143 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 SLC25A2Q9BXI2 301 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 PPP1R14DQ9NXH3 145 aa9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 KLK5Q9Y337 293 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-218ENST00000569569 LCE6AA0A183 80 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 PYYP10082 97 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 Q5BKY6 102 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 MIR17HGQ75NE6 70 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 C1orf158Q8N1D5 194 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 FAM167A-AS1Q96KT0 104 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 AQP10Q96PS8 301 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 OR51M1Q9H341 326 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 TIMM9Q9Y5J7 89 aa9.96□□□□□ -0.82
HERPUD1-218ENST00000569569 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-218ENST00000569569 BOLA2-SMG1P6H3BVE0 249 aa9.95□□□□□ -0.82
HERPUD1-218ENST00000569569 M0R2Z0 102 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms