RNA–Protein interactions for RNA: ENST00000569462.5

CSK-213, Transcript of C-terminal Src kinase, human

TSL 4

Gene CSK, Length 534 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-213	ENST00000569462	RNF182	Q8N6D2	247 aa		13.71	□□□□□ -0.21
CSK-213	ENST00000569462	OR4B1	Q8NGF8	309 aa		13.71	□□□□□ -0.21
CSK-213	ENST00000569462	C11orf68	Q9H3H3	251 aa	Known RBP	13.71	□□□□□ -0.21
CSK-213	ENST00000569462	CLEC5A	Q9NY25	188 aa		13.71	□□□□□ -0.21
CSK-213	ENST00000569462	TRAV5	A0A0B4J249	113 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462		A8MTW9	85 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-213	ENST00000569462	GIP	P09681	153 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-213	ENST00000569462	IGLC2	P0DOY2	106 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	FAM78B	Q5VT40	261 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF738	Q8NE65	137 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	SLC50A1	Q9BRV3	221 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	HRH4	Q9H3N8	390 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.7	□□□□□ -0.22
CSK-213	ENST00000569462	XCL2	Q9UBD3	114 aa		13.7	□□□□□ -0.22
CSK-213	ENST00000569462	C17orf112	F2Z3M2	114 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	DUSP14	O95147	198 aa	Known RBP	13.69	□□□□□ -0.22
CSK-213	ENST00000569462	IFNA5	P01569	189 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	PSG9	Q00887	426 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	PSG3	Q16557	428 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	GCSAML	Q5JQS6	135 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	SMIM3	Q9BZL3	60 aa		13.69	□□□□□ -0.22
CSK-213	ENST00000569462	MIF	P14174	115 aa		13.68	□□□□□ -0.22
CSK-213	ENST00000569462	HLA-DMB	P28068	263 aa		13.68	□□□□□ -0.22
CSK-213	ENST00000569462	GUK1	Q16774	197 aa		13.68	□□□□□ -0.22
CSK-213	ENST00000569462		Q8NAQ8	132 aa		13.68	□□□□□ -0.22
CSK-213	ENST00000569462	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.68	□□□□□ -0.22
CSK-213	ENST00000569462		X6R8D5	127 aa		13.68	□□□□□ -0.22
CSK-213	ENST00000569462		H3BQ15	152 aa		13.67	□□□□□ -0.22
CSK-213	ENST00000569462	SNRPC	P09234	159 aa	Known RBP	13.67	□□□□□ -0.22
CSK-213	ENST00000569462	CNN1	P51911	297 aa	Known RBP	13.67	□□□□□ -0.22
CSK-213	ENST00000569462	FXYD7	P58549	80 aa		13.67	□□□□□ -0.22
CSK-213	ENST00000569462	SCGB1C1	Q8TD33	95 aa		13.67	□□□□□ -0.22
CSK-213	ENST00000569462	SLC35B3	Q9H1N7	401 aa		13.67	□□□□□ -0.22
CSK-213	ENST00000569462	TMEM14C	Q9P0S9	112 aa		13.67	□□□□□ -0.22
CSK-213	ENST00000569462	IGHV4-28	A0A0C4DH34	117 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462		H3BTX0	84 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	SLC17A3	O00476	420 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	AMTN	Q6UX39	209 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	OR8A1	Q8NGG7	326 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	SAT2	Q96F10	170 aa	Predicted RBP	13.66	□□□□□ -0.22
CSK-213	ENST00000569462	AQP10	Q96PS8	301 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	MFF	Q9GZY8	342 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	WFDC1	Q9HC57	220 aa		13.66	□□□□□ -0.22
CSK-213	ENST00000569462	SACS	Q9NZJ4	4579 aa		13.65	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF253	O75346	499 aa		13.65	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.65	□□□□□ -0.22
CSK-213	ENST00000569462	RPUSD4	Q96CM3	377 aa	Known RBP	13.65	□□□□□ -0.22
CSK-213	ENST00000569462	MRPL32	Q9BYC8	188 aa	Known RBP	13.65	□□□□□ -0.22
CSK-213	ENST00000569462	ZNF586	Q9NXT0	402 aa		13.65	□□□□□ -0.22
CSK-213	ENST00000569462	PLEC	Q15149	4684 aa	Known RBP	13.64	□□□□□ -0.23
CSK-213	ENST00000569462	TENM2	Q9NT68	2774 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	CXorf65	A6NEN9	183 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	DEFB4A	O15263	64 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	AMBP	P02760	352 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	ZNF705D	P0CH99	300 aa	Predicted RBP	13.64	□□□□□ -0.23
CSK-213	ENST00000569462	ZNF705B	P0CI00	300 aa	Predicted RBP	13.64	□□□□□ -0.23
CSK-213	ENST00000569462	HIST1H1E	P10412	219 aa	Known RBP	13.64	□□□□□ -0.23
CSK-213	ENST00000569462	HIST1H1A	Q02539	215 aa	Predicted RBP	13.64	□□□□□ -0.23
CSK-213	ENST00000569462		Q5BKY6	102 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	FFAR4	Q5NUL3	377 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	MIR17HG	Q75NE6	70 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	SLC25A2	Q9BXI2	301 aa		13.64	□□□□□ -0.23
CSK-213	ENST00000569462	TRBV19	A0A075B6N1	114 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.63	□□□□□ -0.23
CSK-213	ENST00000569462	RBMY1A1	P0DJD3	496 aa	Known RBP	13.63	□□□□□ -0.23
CSK-213	ENST00000569462	RBMY1C	P0DJD4	496 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	PMS2P11	Q13670	270 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	RBMY1F	Q15415	496 aa	Known RBP	13.63	□□□□□ -0.23
CSK-213	ENST00000569462	FAM167A-AS1	Q96KT0	104 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	NEU1	Q99519	415 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	FUT9	Q9Y231	359 aa		13.63	□□□□□ -0.23
CSK-213	ENST00000569462	LYST	Q99698	3801 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	PYY	P10082	97 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	PDE6H	Q13956	83 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	ZNF266	Q14584	549 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	OR2T35	Q8NGX2	323 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	C11orf45	Q8TAV5	145 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	IGF2BP2-AS1	Q96M15	143 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	GOLT1B	Q9Y3E0	138 aa		13.62	□□□□□ -0.23
CSK-213	ENST00000569462	RYR3	Q15413	4870 aa		13.61	□□□□□ -0.23
CSK-213	ENST00000569462	NUPR2	A6NF83	97 aa		13.61	□□□□□ -0.23
CSK-213	ENST00000569462	RHOB	P62745	196 aa		13.61	□□□□□ -0.23
CSK-213	ENST00000569462	MRPL53	Q96EL3	112 aa	Known RBP	13.61	□□□□□ -0.23
CSK-213	ENST00000569462	TIMM9	Q9Y5J7	89 aa		13.61	□□□□□ -0.23
CSK-213	ENST00000569462	SMIM9	A6NGZ8	99 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	BOLA2-SMG1P6	H3BVE0	249 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	NDUFB4	O95168	129 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	SPINK13	Q1W4C9	94 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	C1orf158	Q8N1D5	194 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.6	□□□□□ -0.23
CSK-213	ENST00000569462	OR51M1	Q9H341	326 aa		13.6	□□□□□ -0.23
CSK-213	ENST00000569462	IGHV3OR16-12	A0A075B7B8	117 aa		13.59	□□□□□ -0.23
CSK-213	ENST00000569462	FXYD6-FXYD2	A0A087WZ82	144 aa		13.59	□□□□□ -0.23
CSK-213	ENST00000569462	PRAC2	D3DTV9	90 aa		13.59	□□□□□ -0.23
CSK-213	ENST00000569462		M0R2Z0	102 aa		13.59	□□□□□ -0.23
CSK-213	ENST00000569462	CRX	O43186	299 aa	Predicted RBP	13.59	□□□□□ -0.23
CSK-213	ENST00000569462	INS	P01308	110 aa		13.59	□□□□□ -0.23
CSK-213	ENST00000569462	PRB4	P10163	310 aa	Predicted RBP	13.59	□□□□□ -0.23
CSK-213	ENST00000569462	NANOS2	P60321	138 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms