RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 H3BMM0 161 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 RPL7P18124 248 aaKnown RBP6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 RPL12P30050 165 aaKnown RBP6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 S100A7P31151 101 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 EMP1P54849 157 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 SPATA31B1PQ5VZV4 182 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 ZNF767PQ75MW2 155 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 IL17DQ8TAD2 202 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 BLNKQ8WV28 456 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 NPCDR1Q9BY65 106 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 SAV1Q9H4B6 383 aaPredicted RBP6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 DNAJC4Q9NNZ3 241 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 RPRMQ9NS64 109 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 RYR3Q15413 4870 aa6.58□□□□□ -1.36
GTF3C1-210ENST00000569394 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 J3KRW8 73 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 SLC17A3O00476 420 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 ISLRO14498 428 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 SPP1P10451 314 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 PLP1P60201 277 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 RHOBP62745 196 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 HIST1H1AQ02539 215 aaPredicted RBP6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 ATP6V1FQ16864 119 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 RGS21Q2M5E4 152 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 VWC2Q2TAL6 325 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 Q5BKY6 102 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 MORN3Q6PF18 240 aaPredicted RBP6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 FOXI2Q6ZQN5 318 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 OR1L4Q8NGR5 311 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 GPR82Q96P67 336 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 MFFQ9GZY8 342 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 TP53TG1Q9Y2A0 90 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 HSPB11Q9Y547 144 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
GTF3C1-210ENST00000569394 TRAV12-2A0A075B6T6 113 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 IGHV4-28A0A0C4DH34 117 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 H3BQ15 152 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 M0R2Z0 102 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 PRM2P04554 102 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 PET100P0DJ07 73 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 PYYP10082 97 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 RPL29P47914 159 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 MEOX2P50222 304 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 CNN1P51911 297 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 NUTF2P61970 127 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 SPINK13Q1W4C9 94 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 BPIFA4PQ86YQ2 179 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 ZNF709Q8N972 641 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 SCGB1C1Q8TD33 95 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 GATAD1Q8WUU5 269 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 WDR61Q9GZS3 305 aaKnown RBP6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 WFDC1Q9HC57 220 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
GTF3C1-210ENST00000569394 STAB2Q8WWQ8 2551 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 A0A0J9YX75 114 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 PRAC2D3DTV9 90 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 SMLR1H3BR10 107 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 IFNA5P01569 189 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 RBMY1A1P0DJD3 496 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 RBMY1CP0DJD4 496 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 PSG9Q00887 426 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 RBMY1FQ15415 496 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 FFAR4Q5NUL3 377 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 PXDC1Q5TGL8 231 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 S100A7AQ86SG5 101 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 PFDN5Q99471 154 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 ATP5SQ99766 215 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 TMEM208Q9BTX3 173 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 SEPSECSQ9HD40 501 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 X6R8D5 127 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 STARD9Q9P2P6 4700 aa6.55□□□□□ -1.36
GTF3C1-210ENST00000569394 FXYD6-FXYD2A0A087WZ82 144 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 C17orf112F2Z3M2 114 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 HMGB3O15347 200 aaKnown RBP6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 OR10J4P0C629 311 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 HTN1P15515 57 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 PSG3Q16557 428 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 BAP18Q8IXM2 172 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 CSNK1G2-AS1Q8NCQ2 148 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 RPUSD4Q96CM3 377 aaKnown RBP6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
GTF3C1-210ENST00000569394 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 A0A087X0K7 114 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 MPDU1O75352 247 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 LCN15Q6UWW0 184 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 EXOC3-AS1Q8N2X6 119 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 Q8NAQ8 132 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 HSD17B11Q8NBQ5 300 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 SLC25A2Q9BXI2 301 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
GTF3C1-210ENST00000569394 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms