RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RNF183Q96D59 192 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 TNFSF18Q9UNG2 199 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 RFNGQ9Y644 331 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
CDT1-203ENST00000569140 COL7A1Q02388 2944 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 hCG_2014768A0A024R1R8 64 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 SLC17A3O00476 420 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 MRPS12O15235 138 aaKnown RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 OR7C2O60412 319 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 CXCL2P19875 107 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 RARRES2Q99969 163 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 MRPL32Q9BYC8 188 aaKnown RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
CDT1-203ENST00000569140 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 FUT9Q9Y231 359 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
CDT1-203ENST00000569140 A0A0J9YX75 114 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 A0A1W2PPV4 95 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 RNF222A6NCQ9 220 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 H3BQ15 152 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 RHOBP62745 196 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
CDT1-203ENST00000569140 PSG3Q16557 428 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 GUK1Q16774 197 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 HRH4Q9H3N8 390 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 ZNF331Q9NQX6 463 aaPredicted RBP9.38□□□□□ -0.91
CDT1-203ENST00000569140 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
CDT1-203ENST00000569140 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDT1-203ENST00000569140 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
CDT1-203ENST00000569140 OR10J4P0C629 311 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
CDT1-203ENST00000569140 PSG9Q00887 426 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 FAM122CQ6P4D5 195 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
CDT1-203ENST00000569140 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 SLC35B3Q9H1N7 401 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 OR51M1Q9H341 326 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 TMEM14CQ9P0S9 112 aa9.37□□□□□ -0.91
CDT1-203ENST00000569140 IGHV3OR16-12A0A075B7B8 117 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 ZNF705FA8MVS1 300 aaPredicted RBP9.36□□□□□ -0.91
CDT1-203ENST00000569140 G3V3Q6 166 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 HIST1H1EP10412 219 aaKnown RBP9.36□□□□□ -0.91
CDT1-203ENST00000569140 M6PRP20645 277 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 ATP6V0CP27449 155 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 TAS2R45P59539 299 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 RAB2AP61019 212 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
CDT1-203ENST00000569140 RPL7L1Q6DKI1 246 aaKnown RBP9.36□□□□□ -0.91
CDT1-203ENST00000569140 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 OR10G9Q8NGN4 311 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 OR10G7Q8NGN6 311 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 MUC7Q8TAX7 377 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 AAMDCQ9H7C9 122 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 EDA2RQ9HAV5 297 aa9.36□□□□□ -0.91
CDT1-203ENST00000569140 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
CDT1-203ENST00000569140 AGRNO00468 2067 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 DEFB4AO15263 64 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 ZFAND6Q6FIF0 208 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 OR8A1Q8NGG7 326 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
CDT1-203ENST00000569140 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 CDC34P49427 236 aaPredicted RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
CDT1-203ENST00000569140 Q6ZNX1 250 aa9.34□□□□□ -0.91
CDT1-203ENST00000569140 EXOC3-AS1Q8N2X6 119 aa9.34□□□□□ -0.91
CDT1-203ENST00000569140 GNPNAT1Q96EK6 184 aaPredicted RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 SAT2Q96F10 170 aaPredicted RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 FAM167A-AS1Q96KT0 104 aa9.34□□□□□ -0.91
CDT1-203ENST00000569140 PSMG3Q9BT73 122 aaPredicted RBP9.34□□□□□ -0.91
CDT1-203ENST00000569140 M0R2Z0 102 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 TAAR5O14804 337 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 ZNF253O75346 499 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 NBEAP1P0C6P0 100 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 ICAM4Q14773 271 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 OR2G3Q8NGZ4 309 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 ARPC5LQ9BPX5 153 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 TMEM208Q9BTX3 173 aa9.33□□□□□ -0.92
CDT1-203ENST00000569140 KANTRA0A1W2PQU2 76 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 PRAC2D3DTV9 90 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 BOLA2-SMG1P6H3BVE0 249 aa9.32□□□□□ -0.92
CDT1-203ENST00000569140 M0R3E3 92 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms