RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 OR5G3P0C626 314 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 LINC00869P0C866 280 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 PET100P0DJ07 73 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-219ENST00000569136 CAMLGP49069 296 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 PSMB3P49720 205 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 BLOC1S1P78537 153 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 BAXQ07812 192 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 VWC2Q2TAL6 325 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 PSMG4Q5JS54 123 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 ACTL10Q5JWF8 245 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 LEMD1Q68G75 181 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 FAM24BQ8N5W8 94 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 LINC00052Q96N35 136 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 ARL6Q9H0F7 186 aa6.74□□□□□ -1.33
CAPN3-219ENST00000569136 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
CAPN3-219ENST00000569136 SIX6O95475 246 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
CAPN3-219ENST00000569136 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
CAPN3-219ENST00000569136 OR1L4Q8NGR5 311 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 PPP1R1CQ8WVI7 109 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 RARRES2Q99969 163 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 C1QTNF4Q9BXJ3 329 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 SLC25A22Q9H936 323 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 RETNQ9HD89 108 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 WDR83OSQ9Y284 106 aa6.73□□□□□ -1.33
CAPN3-219ENST00000569136 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 H3BMM0 161 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 H3BRN7 92 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 CA1P00915 261 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-219ENST00000569136 H2BFSP57053 126 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 DEFB135Q30KP9 77 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 CASC10Q5T4H9 136 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 C10orf113Q5VZT2 155 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 Q6ZNX1 250 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 ASB13Q8WXK3 278 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 PFDN5Q99471 154 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 MGST2Q99735 147 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 RNF126Q9BV68 326 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 ARV1Q9H2C2 271 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 SLC25A32Q9H2D1 315 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 RPRMQ9NS64 109 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 DOK5Q9P104 306 aa6.72□□□□□ -1.33
CAPN3-219ENST00000569136 IGSF23A1L1A6 192 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 SOCS3O14543 225 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 COX7A2P2O60397 106 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 MPC2O95563 127 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 PATE2Q6UY27 113 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 LINC00305Q7Z4B0 112 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 BPIFA4PQ86YQ2 179 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF709Q8N972 641 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 OR11H2Q8NH07 326 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 LRRC20Q8TCA0 184 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 MED28Q9H204 178 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 SAV1Q9H4B6 383 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-219ENST00000569136 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
CAPN3-219ENST00000569136 A0A087X0K7 114 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 H0YIZ8 118 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 DUSP14O95147 198 aaKnown RBP6.7□□□□□ -1.34
CAPN3-219ENST00000569136 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-219ENST00000569136 CXCL2P19875 107 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 FGF7P21781 194 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 B2MP61769 119 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 EWSR1Q01844 656 aaKnown RBP eCLIP6.7□□□□□ -1.34
CAPN3-219ENST00000569136 FGL1Q08830 312 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 GUK1Q16774 197 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 RGS21Q2M5E4 152 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 LRRC37A5PQ49AS3 106 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 OR5C1Q8NGR4 320 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 TMEM37Q8WXS4 190 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 SCRT1Q9BWW7 348 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 KCNIP2Q9NS61 270 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 SLC39A9Q9NUM3 307 aa6.7□□□□□ -1.34
CAPN3-219ENST00000569136 A0A0J9YWU9 116 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 C17orf112F2Z3M2 114 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 IFNA5P01569 189 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 RPL12P30050 165 aaKnown RBP6.69□□□□□ -1.34
CAPN3-219ENST00000569136 PSG9Q00887 426 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 FOXI1Q12951 378 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 OPCMLQ14982 345 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 MIC13Q5XKP0 118 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 THAP6Q8TBB0 222 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 SCGB1C1Q8TD33 95 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 UHRF2Q96PU4 802 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 HRH4Q9H3N8 390 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 OR5AC2Q9NZP5 309 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 ALG5Q9Y673 324 aa6.69□□□□□ -1.34
CAPN3-219ENST00000569136 A0A0J9YX75 114 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 UBE2L5PA0A1B0GUS4 154 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 SMIM9A6NGZ8 99 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 AMBPP02760 352 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 MIFP14174 115 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 CLINT1Q14677 625 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 PSG3Q16557 428 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms