RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 ZNF66Q6ZN08 573 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 GBGT1Q8N5D6 347 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 OR5T1Q8NG75 326 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 CT45A3Q8NHU0 189 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 CACNG8Q8WXS5 425 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 MISP3Q96FF7 219 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 C20orf144Q9BQM9 153 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 MRPL20Q9BYC9 149 aaKnown RBP8.19□□□□□ -1.1
CDH3-208ENST00000569036 KCNIP2Q9NS61 270 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
CDH3-208ENST00000569036 TRBV9A0A0B4J1U6 114 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 TRAV10A0A0B4J240 114 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 RPL35AP18077 110 aaKnown RBP8.18□□□□□ -1.1
CDH3-208ENST00000569036 RPS16P62249 146 aaKnown RBP8.18□□□□□ -1.1
CDH3-208ENST00000569036 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 ZNF726P1Q15940 193 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 VWC2Q2TAL6 325 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 OR10V1Q8NGI7 309 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 OR10J5Q8NHC4 309 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 MRPL30Q8TCC3 161 aaKnown RBP8.18□□□□□ -1.1
CDH3-208ENST00000569036 RBKSQ9H477 322 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 CBY1Q9Y3M2 126 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 ARL2-SNX15V9GYD0 113 aa8.18□□□□□ -1.1
CDH3-208ENST00000569036 MPDU1O75352 247 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 GZMHP20718 246 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 YPEL3P61236 119 aaPredicted RBP8.17□□□□□ -1.1
CDH3-208ENST00000569036 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 LCN15Q6UWW0 184 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 Q6ZTC4 211 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 TMEM144Q7Z5S9 345 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 OR11H2Q8NH07 326 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 PARLQ9H300 379 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 PRO1933Q9H354 126 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 MAP6D1Q9H9H5 199 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 CCL28Q9NRJ3 127 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 FKBP11Q9NYL4 201 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 HSPB7Q9UBY9 170 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 LY96Q9Y6Y9 160 aa8.17□□□□□ -1.1
CDH3-208ENST00000569036 IGKV1D-13A0A0B4J2D9 117 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 RBMXL2O75526 392 aaKnown RBP8.16□□□□□ -1.1
CDH3-208ENST00000569036 CA2P00918 260 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 IGKV1-13P0DP09 117 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 HLA-DMBP28068 263 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 SELENOTP62341 195 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 SERTAD4-AS1Q5TG53 156 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 ZNF562Q6V9R5 426 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 SPATA12Q7Z6I5 190 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 USMG5Q96IX5 58 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 KCNIP1Q9NZI2 227 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
CDH3-208ENST00000569036 SCTP09683 121 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 CBLN1P23435 193 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 CATR1Q13166 79 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 TMEM183BQ1AE95 376 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 SYT8Q8NBV8 401 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 OR1L6Q8NGR2 347 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 RSG1Q9BU20 258 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 GNG12Q9UBI6 72 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 NAGKQ9UJ70 344 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
CDH3-208ENST00000569036 IGKV1-6A0A0C4DH72 117 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 ZNF705GA8MUZ8 300 aaPredicted RBP8.14□□□□□ -1.11
CDH3-208ENST00000569036 S1PR2O95136 353 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 MT-ND6P03923 174 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 RPP30P78346 268 aaKnown RBP8.14□□□□□ -1.11
CDH3-208ENST00000569036 TOMM20LQ6UXN7 152 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 C5orf24Q7Z6I8 188 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 UBE2DNLQ8IWF7 75 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 OR51H1Q8NH63 302 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 NEK7Q8TDX7 302 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 CYYR1Q96J86 154 aa8.14□□□□□ -1.11
CDH3-208ENST00000569036 A0A1W2PPQ1 181 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 HMGB3O15347 200 aaKnown RBP8.13□□□□□ -1.11
CDH3-208ENST00000569036 DLEU1O43261 78 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 KRASP01116 189 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 REG1AP05451 166 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 P0C879 139 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 FXYD3Q14802 87 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 AARDQ4LEZ3 155 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 OR10G9Q8NGN4 311 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 OR10G7Q8NGN6 311 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 ZNF503Q96F45 646 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 MIEN1Q9BRT3 115 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.13□□□□□ -1.11
CDH3-208ENST00000569036 FUT9Q9Y231 359 aa8.13□□□□□ -1.11
CDH3-208ENST00000569036 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
CDH3-208ENST00000569036 UBE2L5PA0A1B0GUS4 154 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms