RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	SVBP	Q8N300	66 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	C5orf17	Q8NAS9	161 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	GLMP	Q8WWB7	406 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	HIST1H2BA	Q96A08	127 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329		Q9H3A6	140 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	AAMDC	Q9H7C9	122 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	PEMT	Q9UBM1	199 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	SMPX	Q9UHP9	88 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	ZNF785	A8K8V0	405 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	APOC3	P02656	99 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	SYNJ2BP	P57105	145 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	FAM90A2P	Q658T7	463 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	HIST2H2BD	Q6DRA6	164 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	ARL6IP6	Q8N6S5	226 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	SLC50A1	Q9BRV3	221 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	NIPSNAP3B	Q9BS92	247 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	RHPN1-AS1	Q9BWJ2	59 aa		11.75	□□□□□ -0.53
CSK-211	ENST00000568329	TMEM213	A2RRL7	107 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329		M0QZ24	198 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	APOH	P02749	345 aa	Predicted RBP	11.74	□□□□□ -0.53
CSK-211	ENST00000568329	FHL3	Q13643	280 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	TM4SF20	Q53R12	229 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	SAMD13	Q5VXD3	122 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	C8orf86	Q6ZUL3	223 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	NDUFA11	Q86Y39	141 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	CLEC5A	Q9NY25	188 aa		11.74	□□□□□ -0.53
CSK-211	ENST00000568329	SCO2	A0A1W2PP80	73 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	PGP	A6NDG6	321 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	ADARB2-AS1	A8MUL3	147 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	ZNF727	A8MUV8	499 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	CHEK1	O14757	476 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	NDUFB4	O95168	129 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	DEFB136	Q30KP8	78 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	CMTM2	Q8TAZ6	248 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	SMIM7	Q9BQ49	75 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	PARL	Q9H300	379 aa		11.73	□□□□□ -0.53
CSK-211	ENST00000568329	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.72	□□□□□ -0.53
CSK-211	ENST00000568329	IGHV3OR16-13	A0A075B7E8	117 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	IGHV3-49	A0A0A0MS15	119 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	IGHV3-74	A0A0B4J1X5	117 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	IGHV3-66	A0A0C4DH42	116 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329		A0A1W2PRX2	142 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	CCL24	O00175	119 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	SNAPIN	O95295	136 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	SLC25A5	P05141	298 aa	Known RBP	11.72	□□□□□ -0.53
CSK-211	ENST00000568329	PNRC1	Q12796	327 aa	Predicted RBP	11.72	□□□□□ -0.53
CSK-211	ENST00000568329	EPDR1	Q9UM22	224 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	SMAD5-AS1	Q9Y6J3	95 aa		11.72	□□□□□ -0.53
CSK-211	ENST00000568329	SNRPC	P09234	159 aa	Known RBP	11.71	□□□□□ -0.53
CSK-211	ENST00000568329	SLURP1	P55000	103 aa		11.71	□□□□□ -0.53
CSK-211	ENST00000568329	CITED1	Q99966	193 aa		11.71	□□□□□ -0.53
CSK-211	ENST00000568329	ATG101	Q9BSB4	218 aa		11.71	□□□□□ -0.53
CSK-211	ENST00000568329	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.71	□□□□□ -0.53
CSK-211	ENST00000568329	PRELID1	Q9Y255	219 aa		11.71	□□□□□ -0.53
CSK-211	ENST00000568329	SERTM2	A0A1B0GWG4	89 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	C2orf70	A6NJV1	201 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329		H3BTX0	84 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329		K7EQM0	130 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	PEX7	O00628	323 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	S100A9	P06702	114 aa	Known RBP	11.71	□□□□□ -0.54
CSK-211	ENST00000568329	AKR1C3	P42330	323 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	CSN1S1	P47710	185 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	CNN1	P51911	297 aa	Known RBP	11.71	□□□□□ -0.54
CSK-211	ENST00000568329	ZNF674	Q2M3X9	581 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	OR9G4	Q8NGQ1	327 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	C2CD4C	Q8TF44	421 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	TMEM158	Q8WZ71	300 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	RAX2	Q96IS3	184 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	C17orf77	Q96MU5	243 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	NAT8	Q9UHE5	227 aa		11.71	□□□□□ -0.54
CSK-211	ENST00000568329	SLC17A3	O00476	420 aa		11.7	□□□□□ -0.54
CSK-211	ENST00000568329	CBLN1	P23435	193 aa		11.7	□□□□□ -0.54
CSK-211	ENST00000568329	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.7	□□□□□ -0.54
CSK-211	ENST00000568329	TVP23C	Q96ET8	276 aa		11.7	□□□□□ -0.54
CSK-211	ENST00000568329	NRN1	Q9NPD7	142 aa		11.7	□□□□□ -0.54
CSK-211	ENST00000568329		C9JCJ5	164 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	TCRA	P04437	139 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	TAS2R60	P59551	318 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	TMEM241	Q24JQ0	296 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	LURAP1L	Q8IV03	231 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	EXOC3-AS1	Q8N2X6	119 aa		11.69	□□□□□ -0.54
CSK-211	ENST00000568329	MRPL53	Q96EL3	112 aa	Known RBP	11.69	□□□□□ -0.54
CSK-211	ENST00000568329	ATR	Q13535	2644 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	FBLL1	A6NHQ2	334 aa	Known RBP	11.68	□□□□□ -0.54
CSK-211	ENST00000568329	FOLR2	P14207	255 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	RPL35	P42766	123 aa	Known RBP	11.68	□□□□□ -0.54
CSK-211	ENST00000568329	RPL11	P62913	178 aa	Known RBP	11.68	□□□□□ -0.54
CSK-211	ENST00000568329	GUCA2B	Q16661	112 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	NSUN5P1	Q3KNT7	163 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	TCF24	Q7RTU0	167 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	DLX4	Q92988	240 aa	Predicted RBP	11.68	□□□□□ -0.54
CSK-211	ENST00000568329	DUX3	Q96PT4	197 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	LY96	Q9Y6Y9	160 aa		11.68	□□□□□ -0.54
CSK-211	ENST00000568329	UBE2G1	P62253	170 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	CLRN3	Q8NCR9	226 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	FMC1	Q96HJ9	113 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	DERL1	Q9BUN8	251 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	SDF2L1	Q9HCN8	221 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	MLX	Q9UH92	298 aa		11.67	□□□□□ -0.54
CSK-211	ENST00000568329	KLF12	Q9Y4X4	402 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms