RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 APOHP02749 345 aaPredicted RBP5.46□□□□□ -1.54
SMG1-215ENST00000568239 MYCNOSP40205 109 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 FAM3BP58499 235 aaPredicted RBP5.46□□□□□ -1.54
SMG1-215ENST00000568239 KLK9Q2XQG4 91 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 IGFL4Q6B9Z1 124 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 TEX38Q6PEX7 206 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 GOLT1AQ6ZVE7 132 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 ZNF414Q96IQ9 312 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 ATG101Q9BSB4 218 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 RNASE7Q9H1E1 156 aaKnown RBP5.46□□□□□ -1.54
SMG1-215ENST00000568239 OTORQ9NRC9 128 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 CDC42EP3Q9UKI2 254 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 KLK9Q9UKQ9 250 aa5.46□□□□□ -1.54
SMG1-215ENST00000568239 FLNBO75369 2602 aaKnown RBP5.45□□□□□ -1.54
SMG1-215ENST00000568239 CUBNO60494 3623 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 C1orf196B1AJZ1 125 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 IGLV1-40P01703 118 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 TCRAP04437 139 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 FAM210BQ96KR6 192 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 MRPS12O15235 138 aaKnown RBP5.45□□□□□ -1.54
SMG1-215ENST00000568239 BUB3O43684 328 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 TAS2R60P59551 318 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 SLC35B1P78383 322 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 KCNIP4Q6PIL6 250 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 UNQ9165/PRO28630Q6UXU0 137 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 TEX29Q8N6K0 151 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 ASCL2Q99929 193 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 SMR3AQ99954 134 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 SELENOKQ9Y6D0 94 aa5.45□□□□□ -1.54
SMG1-215ENST00000568239 PPP1R2P9O14990 202 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 IGHG4P01861 327 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 RPLP1P05386 114 aaKnown RBP5.44□□□□□ -1.54
SMG1-215ENST00000568239 RAB5BP61020 215 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 RPL11P62913 178 aaKnown RBP5.44□□□□□ -1.54
SMG1-215ENST00000568239 CFHR3Q02985 330 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 TMEM183BQ1AE95 376 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 SIGLEC15Q6ZMC9 328 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 PRNTQ86SH4 94 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 IGF2BP2-AS1Q96M15 143 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 ZNF702PQ9H963 129 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 WNK1Q9H4A3 2382 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 IGKV3-7A0A075B6H7 116 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.44□□□□□ -1.54
SMG1-215ENST00000568239 CLPSL1A2RUU4 121 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 FAM181BA6NEQ2 426 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 CD5LO43866 347 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 CD99P14209 185 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 PSMB8P28062 276 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 IBA57Q5T440 356 aaKnown RBP5.44□□□□□ -1.54
SMG1-215ENST00000568239 WDR73Q6P4I2 378 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 YPEL4Q96NS1 127 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 TCEAL7Q9BRU2 100 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 LY96Q9Y6Y9 160 aa5.44□□□□□ -1.54
SMG1-215ENST00000568239 ZNF705GA8MUZ8 300 aaPredicted RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 K7EQM0 130 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 GGCTO75223 188 aaKnown RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 PFN1P07737 140 aaKnown RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 CSN1S1P47710 185 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 PSG9Q00887 426 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 KHDC1LQ5JSQ8 128 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 GPR82Q96P67 336 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 PRDM13Q9H4Q3 707 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 PEF1Q9UBV8 284 aaKnown RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 SMAD5-AS1Q9Y6J3 95 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 NDUFA4O00483 81 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 SPINK4O60575 86 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 CA1P00915 261 aaPredicted RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 GCGP01275 180 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 IGLV2-8P01709 118 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 TRGC2P03986 189 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 S100A6P06703 90 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 HLA-DMBP28068 263 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 TCL1AP56279 114 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 FLI1Q01543 452 aaPredicted RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 KRTAP1-1Q07627 177 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 PDE6HQ13956 83 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 LYPD1Q8N2G4 141 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 FMC1Q96HJ9 113 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 CLUHP3Q96NS8 147 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 DNAJC9-AS1A6NH13 148 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 RPEL1Q2QD12 228 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 Q71RC1 249 aaPredicted RBP5.43□□□□□ -1.54
SMG1-215ENST00000568239 RNF182Q8N6D2 247 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 ATP6V0BQ99437 205 aa5.43□□□□□ -1.54
SMG1-215ENST00000568239 TRBV24-1A0A075B6N3 115 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 ZNF705FA8MVS1 300 aaPredicted RBP5.42□□□□□ -1.54
SMG1-215ENST00000568239 DIRC3C9JPN6 131 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 BRI3O95415 125 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 FOLR2P14207 255 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 FAM209BQ5JX69 171 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 SAV1Q9H4B6 383 aaPredicted RBP5.42□□□□□ -1.54
SMG1-215ENST00000568239 KLF12Q9Y4X4 402 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 SORL1Q92673 2214 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 IGKV2-40A0A087WW87 121 aaPredicted RBP5.42□□□□□ -1.54
SMG1-215ENST00000568239 LOC105371267A0A1B0GV96 52 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 IGKV2D-40P01614 121 aaPredicted RBP5.42□□□□□ -1.54
SMG1-215ENST00000568239 FAM106AQ4KMX7 169 aa5.42□□□□□ -1.54
SMG1-215ENST00000568239 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms