RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 M0R378 163 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TP53I11O14683 189 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 OVOL1O14753 267 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 NPYP01303 97 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 FABP2P12104 132 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 DEFA4P12838 97 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF22P17026 224 aaPredicted RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 S100A1P23297 94 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 RPL28P46779 137 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 HIST1H1AQ02539 215 aaPredicted RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF117Q03924 483 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 EIF3IQ13347 325 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 SPCS2Q15005 226 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF141Q15928 474 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 MIAQ16674 131 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 C1orf140Q5VVS0 124 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 C4orf22Q6V702 233 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 MIR17HGQ75NE6 70 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 LYPD6Q86Y78 171 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 LYG1Q8N1E2 194 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 HIST3H2BBQ8N257 126 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 RPP25LQ8N5L8 163 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 C3orf22Q8N5N4 141 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 C1orf64Q8NEQ6 169 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 OR10P1Q8NGE3 313 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TERB2Q8NHR7 220 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 CLDND2Q8NHS1 167 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 CANT1Q8WVQ1 401 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 SCGB3A1Q96QR1 104 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 OR8B2Q96RD0 313 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TPT1P8Q9HAU6 139 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 XAGE1AQ9HD64 81 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TXNL4BQ9NX01 149 aaKnown RBP2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 RNF11Q9Y3C5 154 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 MINOS1-NBL1R4GNA1 71 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 NID2Q14112 1375 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 ANKRD36BQ8N2N9 1353 aa2.06□□□□□ -2.08
HERPUD1-211ENST00000566550 TEX15Q9BXT5 2789 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 PIEZO2Q9H5I5 2752 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A0D9SEW6 157 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A1B0GW64 132 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 LINC00587B1AMM8 73 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 GGTLC3B5MD39 225 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 J3QKU1 62 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 SLC22A1O15245 554 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 SULT1C4O75897 302 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 CST7O76096 145 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 OR2H2O95918 312 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 C1QAP02745 245 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 C1QCP02747 245 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 MT-ND4LP03901 98 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 IGKV1-16P04430 117 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 MPC1LP0DKB6 136 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 GZMBP10144 247 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 CCL5P13501 91 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 SDC2P34741 201 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 XCL1P47992 114 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 NDUFA6P56556 154 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 UBE2BP63146 152 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 PLCXD2Q0VAA5 305 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 BIKQ13323 160 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 NEDD8Q15843 81 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 DPPA3Q6W0C5 159 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 TCTE3Q8IZS6 198 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 TEX29Q8N6K0 151 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 MUC7Q8TAX7 377 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 ZNF714Q96N38 554 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 HIST1H2BLQ99880 126 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 SCRT1Q9BWW7 348 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 MRPL32Q9BYC8 188 aaKnown RBP2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 MRPL16Q9NX20 251 aaKnown RBP2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 HEY1Q9Y5J3 304 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 TIMM9Q9Y5J7 89 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 CCNB3Q8WWL7 1395 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 KALRNO60229 2985 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 DNHD1Q96M86 4753 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 CEP250Q9BV73 2442 aa2.05□□□□□ -2.08
HERPUD1-211ENST00000566550 DMXL1Q9Y485 3027 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 IGLV3-12A0A075B6K2 115 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 IGHV3OR16-8A0A075B7F1 116 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 TRAV5A0A0B4J249 113 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 A0A0J9YW62 118 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 C11orf86A6NJI1 115 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 H3BPC8 53 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 SIPA1L1O43166 1804 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 DPM2O94777 84 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 SPTA1P02549 2419 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 PSMB8P28062 276 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 MYH11P35749 1972 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 DYNLT3P51808 116 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 FOXA1P55317 472 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 ARPP19P56211 112 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 SUPT4H1P63272 117 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 RELAQ04206 551 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 KHDC3LQ587J8 217 aa2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 KPRPQ5T749 579 aaPredicted RBP2.04□□□□□ -2.08
HERPUD1-211ENST00000566550 MAST2Q6P0Q8 1798 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms