RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF331Q9NQX6 463 aaPredicted RBP15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 FUT9Q9Y231 359 aa15.46■□□□□ 0.06
SHCBP1-205ENST00000566016 HMSDA8MTL9 139 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 SMLR1H3BR10 107 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 DEFB135Q30KP9 77 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 LRRC20Q8TCA0 184 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 RNF183Q96D59 192 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 FAM167A-AS1Q96KT0 104 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 OVOL2Q9BRP0 275 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 CLEC5AQ9NY25 188 aa15.45■□□□□ 0.06
SHCBP1-205ENST00000566016 BORCS7-ASMTA0A0B4J1R7 106 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 A0A0J9YX75 114 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 H3BQ15 152 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 TAAR5O14804 337 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 CA1P00915 261 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 NUTF2P61970 127 aaKnown RBP15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 PDE6HQ13956 83 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 GDF5OSQ5U4N7 250 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 EBLN2Q6P2I7 272 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 SAT2Q96F10 170 aaPredicted RBP15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 SLC25A2Q9BXI2 301 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 MFFQ9GZY8 342 aa15.44■□□□□ 0.06
SHCBP1-205ENST00000566016 M6PRP20645 277 aa15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 RHOBP62745 196 aa15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 ACOT6Q3I5F7 207 aaPredicted RBP15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 MIR17HGQ75NE6 70 aa15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 RNF182Q8N6D2 247 aa15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 HSD17B11Q8NBQ5 300 aa15.43■□□□□ 0.06
SHCBP1-205ENST00000566016 A8MTW9 85 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 SPRY2O43597 315 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 GIG44P09565 113 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 HIST1H1EP10412 219 aaKnown RBP15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 ATP6V0CP27449 155 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 SERF2P84101 59 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 PSG3Q16557 428 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 GNPNAT1Q96EK6 184 aaPredicted RBP15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 ZNF586Q9NXT0 402 aa15.42■□□□□ 0.06
SHCBP1-205ENST00000566016 TRBV19A0A075B6N1 114 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 SLC17A3O00476 420 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 JTBO76095 146 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 DEFB1P60022 68 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 RPL7L1Q6DKI1 246 aaKnown RBP15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 ZNF738Q8NE65 137 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 OR11H4Q8NGC9 324 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 ST6GAL2Q96JF0 529 aa15.41■□□□□ 0.06
SHCBP1-205ENST00000566016 PYYP10082 97 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 C4BPBP20851 252 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 TAS2R45P59539 299 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 IGFL4Q6B9Z1 124 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 TCTE3Q8IZS6 198 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 KCNRGQ8N5I3 272 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 C1QTNF4Q9BXJ3 329 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 EDA2RQ9HAV5 297 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 RFNGQ9Y644 331 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 F6UB75 175 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 KHDC3LQ587J8 217 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 OR51M1Q9H341 326 aa15.4■□□□□ 0.06
SHCBP1-205ENST00000566016 MBP02144 154 aa15.39■□□□□ 0.05
SHCBP1-205ENST00000566016 SNRPCP09234 159 aaKnown RBP15.39■□□□□ 0.05
SHCBP1-205ENST00000566016 PAXXQ9BUH6 204 aa15.39■□□□□ 0.05
SHCBP1-205ENST00000566016 A0A0D9SG52 128 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 H3BTX0 84 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 DUSP14O95147 198 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 HLA-DMBP28068 263 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 RAB2AP61019 212 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 PSG9Q00887 426 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 OR10G4Q8NGN3 311 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 OR10G9Q8NGN4 311 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 OR10G7Q8NGN6 311 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 RPUSD4Q96CM3 377 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 MRPL53Q96EL3 112 aaKnown RBP15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 SH3BGRL3Q9H299 93 aa15.38■□□□□ 0.05
SHCBP1-205ENST00000566016 A0A1W2PPV4 95 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 OR7C2O60412 319 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 NDUFB4O95168 129 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 NBEAP1P0C6P0 100 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 CSNK1G2-AS1Q8NCQ2 148 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 OR4B1Q8NGF8 309 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 OR8A1Q8NGG7 326 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 FXYD5Q96DB9 178 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 ARPC5LQ9BPX5 153 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 CYTL1Q9NRR1 136 aa15.37■□□□□ 0.05
SHCBP1-205ENST00000566016 CNN1P51911 297 aaKnown RBP15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 AMTNQ6UX39 209 aa15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 PQLC2Q6ZP29 291 aa15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 RNF141Q8WVD5 230 aa15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 ZNF503Q96F45 646 aa15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 PRELID1Q9Y255 219 aa15.36■□□□□ 0.05
SHCBP1-205ENST00000566016 UBE2L3P68036 154 aaKnown RBP15.35■□□□□ 0.05
SHCBP1-205ENST00000566016 RPP25LQ8N5L8 163 aaKnown RBP15.35■□□□□ 0.05
SHCBP1-205ENST00000566016 DNAH7Q8WXX0 4024 aa15.35■□□□□ 0.05
SHCBP1-205ENST00000566016 IGKV3-20P01619 116 aa15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 OR10J4P0C629 311 aa15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 CDC34P49427 236 aaPredicted RBP15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 BLNKQ8WV28 456 aa15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 RARRES2Q99969 163 aa15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 AAMDCQ9H7C9 122 aa15.34■□□□□ 0.05
SHCBP1-205ENST00000566016 ZNF705EA8MWA4 302 aaPredicted RBP15.33■□□□□ 0.05
SHCBP1-205ENST00000566016 FAM122CQ6P4D5 195 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms