RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 KCNIP2Q9NS61 270 aa11.21□□□□□ -0.61
COMMD4-212ENST00000565517 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
COMMD4-212ENST00000565517 F6UB75 175 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
COMMD4-212ENST00000565517 IGKV3-20P01619 116 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 IGLC2P0DOY2 106 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 PSG3Q16557 428 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 GUK1Q16774 197 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 IGFL4Q6B9Z1 124 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 RNF182Q8N6D2 247 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF709Q8N972 641 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 Q8NAQ8 132 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
COMMD4-212ENST00000565517 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 X6R8D5 127 aa11.2□□□□□ -0.62
COMMD4-212ENST00000565517 C17orf112F2Z3M2 114 aa11.19□□□□□ -0.62
COMMD4-212ENST00000565517 OXA1LQ15070 435 aa11.19□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF738Q8NE65 137 aa11.19□□□□□ -0.62
COMMD4-212ENST00000565517 PARD6GQ9BYG4 376 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-212ENST00000565517 TRAV5A0A0B4J249 113 aa11.18□□□□□ -0.62
COMMD4-212ENST00000565517 IFNA5P01569 189 aa11.18□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF705AQ6ZN79 300 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-212ENST00000565517 SAT2Q96F10 170 aaPredicted RBP11.18□□□□□ -0.62
COMMD4-212ENST00000565517 NEU1Q99519 415 aa11.18□□□□□ -0.62
COMMD4-212ENST00000565517 TMEM14CQ9P0S9 112 aa11.18□□□□□ -0.62
COMMD4-212ENST00000565517 TENM2Q9NT68 2774 aa11.18□□□□□ -0.62
COMMD4-212ENST00000565517 H3BQ15 152 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF253O75346 499 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 AMBPP02760 352 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-212ENST00000565517 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
COMMD4-212ENST00000565517 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 OR8A1Q8NGG7 326 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 SCGB1C1Q8TD33 95 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 MFFQ9GZY8 342 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 SLC35B3Q9H1N7 401 aa11.17□□□□□ -0.62
COMMD4-212ENST00000565517 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF705FA8MVS1 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF705DP0CH99 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF705BP0CI00 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 HIST1H1EP10412 219 aaKnown RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 FXYD7P58549 80 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 GCSAMLQ5JQS6 135 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
COMMD4-212ENST00000565517 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
COMMD4-212ENST00000565517 STARD9Q9P2P6 4700 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 KMT2CQ8NEZ4 4911 aaKnown RBP11.15□□□□□ -0.62
COMMD4-212ENST00000565517 CXorf65A6NEN9 183 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 NUPR2A6NF83 97 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 DEFB4AO15263 64 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 SNRPCP09234 159 aaKnown RBP11.15□□□□□ -0.62
COMMD4-212ENST00000565517 PDE6HQ13956 83 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 AQP10Q96PS8 301 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 SMIM3Q9BZL3 60 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 WFDC1Q9HC57 220 aa11.15□□□□□ -0.62
COMMD4-212ENST00000565517 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 SLC17A3O00476 420 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
COMMD4-212ENST00000565517 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
COMMD4-212ENST00000565517 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 SLC25A2Q9BXI2 301 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
COMMD4-212ENST00000565517 H3BTX0 84 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 HIST1H1AQ02539 215 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-212ENST00000565517 Q5BKY6 102 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 MIR17HGQ75NE6 70 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
COMMD4-212ENST00000565517 LCE6AA0A183 80 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 BOLA2-SMG1P6H3BVE0 249 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 PYYP10082 97 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
COMMD4-212ENST00000565517 RHOBP62745 196 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 ZNF266Q14584 549 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 PHLDA1Q8WV24 401 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-212ENST00000565517 OR51M1Q9H341 326 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 PRELID1Q9Y255 219 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 KLK5Q9Y337 293 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-212ENST00000565517 TIMM9Q9Y5J7 89 aa11.12□□□□□ -0.63
COMMD4-212ENST00000565517 M0R2Z0 102 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 CRXO43186 299 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-212ENST00000565517 NDUFB4O95168 129 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 LYSTQ99698 3801 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 RFNGQ9Y644 331 aa11.11□□□□□ -0.63
COMMD4-212ENST00000565517 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms