RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KNCNA6PVL3 124 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 EREGO14944 169 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 CST7O76096 145 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 IFNA5P01569 189 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 NPPCP23582 126 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 RPL12P30050 165 aaKnown RBP6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 AKR1C1Q04828 323 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 VWC2Q2TAL6 325 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 ACTL10Q5JWF8 245 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 PXDC1Q5TGL8 231 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 TOMM20LQ6UXN7 152 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 ACOT7LQ6ZUV0 252 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 ZNF546Q86UE3 836 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 LILRB2Q8N423 598 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 INO80EQ8NBZ0 244 aaPredicted RBP6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 OR2T35Q8NGX2 323 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 TMEM147Q9BVK8 224 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 TMEM231Q9H6L2 316 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 UQCC1Q9NVA1 299 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 MRPL36Q9P0J6 103 aaKnown RBP6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 DKK2Q9UBU2 259 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 PUS1Q9Y606 427 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS9D1-205ENST00000565452 IGKV1D-37A0A075B6S9 117 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 IGSF23A1L1A6 192 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 HMSDA8MTL9 139 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 PSG1P11464 419 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 CRYBB3P26998 211 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 NHLH2Q02577 135 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 ARL16Q0P5N6 197 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 TIGITQ495A1 244 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 TTC32Q5I0X7 151 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 FAM24BQ8N5W8 94 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 GRAMD2BQ96HH9 432 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 AQP10Q96PS8 301 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 METTL26Q96S19 204 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 Q9H8V8 135 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 MBD2Q9UBB5 411 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 XCL2Q9UBD3 114 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 HSPB11Q9Y547 144 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 RFNGQ9Y644 331 aa6.36□□□□□ -1.39
VPS9D1-205ENST00000565452 IGKV1OR2-108A0A075B7D4 117 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 SMCO3A2RU48 225 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 CCNKO75909 580 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 EIF2B2P49770 351 aaKnown RBP6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 AP2S1P53680 142 aaPredicted RBP6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 PLP1P60201 277 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 FAM222AQ5U5X8 452 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 CYP2G1PQ6ZSU1 146 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 OR5C1Q8NGR4 320 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 VSIRQ9H7M9 311 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 ZFAND3Q9H8U3 227 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 WDR83OSQ9Y284 106 aa6.35□□□□□ -1.39
VPS9D1-205ENST00000565452 TAAR5O14804 337 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 AGPAT2O15120 278 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 NUDT3O95989 172 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 IL4P05112 153 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 HNRNPCP07910 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 RPL29P47914 159 aaKnown RBP6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 CAMLGP49069 296 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 DAD1P61803 113 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ZNF90Q03938 601 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ZNF266Q14584 549 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ICAM4Q14773 271 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 C1orf194Q5T5A4 169 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 Q6ZRG5 221 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ZNF709Q8N972 641 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 SCGB1C1Q8TD33 95 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ST8SIA2Q92186 375 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 ATP5SQ99766 215 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 KCNIP2Q9NS61 270 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 TNFSF18Q9UNG2 199 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 U3KQE9 123 aa6.34□□□□□ -1.39
VPS9D1-205ENST00000565452 A0A0D9SG52 128 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 C17orf112F2Z3M2 114 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 K7EQG2 157 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF688P0C7X2 276 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 OR2F1Q13607 317 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 CLINT1Q14677 625 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 USF2Q15853 346 aaPredicted RBP6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF705AQ6ZN79 300 aaPredicted RBP6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 TCTE3Q8IZS6 198 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 STXBP6Q8NFX7 210 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 GPR82Q96P67 336 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 NACAE9PAV3 2078 aa6.33□□□□□ -1.4
VPS9D1-205ENST00000565452 IGHV3OR16-12A0A075B7B8 117 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 FXYD6-FXYD2A0A087WZ82 144 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 IGHV3-66A0A0C4DH42 116 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 A0A1W2PPQ1 181 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 HELTA6NFD8 242 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 ZNF705FA8MVS1 300 aaPredicted RBP6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 BUB3O43684 328 aa6.32□□□□□ -1.4
VPS9D1-205ENST00000565452 HYPMO75409 117 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms