RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ZNF319Q9P2F9 582 aa4.2□□□□□ -1.74
SMG1-211ENST00000565324 IGKV1D-13A0A0B4J2D9 117 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 hADV29S1A0JD25 119 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 C17orf100A8MU93 164 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 IGHG2P01859 326 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 IGKV1-13P0DP09 117 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 LYL1P12980 280 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 NAA38Q9BRA0 125 aaKnown RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 ZNF492Q9P255 531 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 ZNF561-AS1K7EIQ3 104 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 IGLC2P0DOY2 106 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 IGLC3P0DOY3 106 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 SLC25A28Q96A46 364 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 CARD19Q96LW7 228 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 POLR3KQ9Y2Y1 108 aaPredicted RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 CHCHD2Q9Y6H1 151 aaPredicted RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 IGHV2-26A0A0B4J1V2 119 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 PSCAO43653 123 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 CRLF1O75462 422 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 NBL1P41271 181 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 TCF15Q12870 199 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 LHFPL1Q86WI0 220 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 RPP25LQ8N5L8 163 aaKnown RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 KNCNA6PVL3 124 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 CD33P20138 364 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 ZNF474Q6S9Z5 364 aaPredicted RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 SRXN1Q9BYN0 137 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 A0A1B0GWJ7 208 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 C5orf67F2Z3F1 127 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 H0YIZ8 118 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 FNDC1Q4ZHG4 1894 aaPredicted RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 HAMPP81172 84 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 REG4Q9BYZ8 158 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 KLRD1Q13241 179 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 C1orf159Q96HA4 380 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 ZNF625Q96I27 306 aaPredicted RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 SHISA9B4DS77 424 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 TNCP24821 2201 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 HTN3P15516 51 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 SUPT4H1P63272 117 aaKnown RBP4.19□□□□□ -1.74
SMG1-211ENST00000565324 ETDBQ3ZM63 59 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 LAIR2Q6ISS4 152 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 ADAMTS7Q9UKP4 1686 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 CACNA1GO43497 2377 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 TRBV6-6A0A0A6YYG2 114 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 TMEM14EPQ6UXP3 125 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 EXOC3-AS1Q8N2X6 119 aa4.19□□□□□ -1.74
SMG1-211ENST00000565324 THSD7AQ9UPZ6 1657 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 J3QRE1 110 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 NDUFB8O95169 186 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 PCOLCEQ15113 449 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 C15orf32Q32M92 178 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 Q6ZS49 121 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 USF3Q68DE3 2245 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 GATA2P23769 480 aaPredicted RBP4.18□□□□□ -1.74
SMG1-211ENST00000565324 PPIFP30405 207 aaKnown RBP4.18□□□□□ -1.74
SMG1-211ENST00000565324 FUSP35637 526 aaKnown RBP eCLIP4.18□□□□□ -1.74
SMG1-211ENST00000565324 FAM219BQ5XKK7 198 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 R3HDMLQ9H3Y0 253 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 C7orf69Q9H7B7 122 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 Q8N8P6 123 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 WBP1Q96G27 269 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 THAP8Q8NA92 274 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 MED13Q9UHV7 2174 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 TRAV13-1A0A0B4J241 112 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 SYNJ2BPP57105 145 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 UBE2DNLQ8IWF7 75 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 SPSB2Q99619 263 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 TP53TG1Q9Y2A0 90 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 WFDC1Q9HC57 220 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 IGLV3-32A0A0A0MS00 114 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 TRAV40A0A0B4J280 105 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 DSCR9P59020 149 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 RMI2Q96E14 147 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 TIMM23O14925 209 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 F6UB75 175 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 M0R1W7 72 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 LINC00114Q6XXX2 140 aa4.18□□□□□ -1.74
SMG1-211ENST00000565324 CCL3L1P16619 93 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 C15orf53Q8NAA6 179 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 CYTL1Q9NRR1 136 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 DMRTC2Q8IXT2 367 aaPredicted RBP4.17□□□□□ -1.74
SMG1-211ENST00000565324 SLC22A18ASQ8N1D0 253 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 FDCSPQ8NFU4 85 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 SCRT1Q9BWW7 348 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 KIAA1671Q9BY89 1806 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 TRBV25-1A0A075B6N4 114 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 NPYP01303 97 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 SIGLEC12Q96PQ1 595 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 SRRM5B3KS81 715 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 H3BMG7 143 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 IGHV3-11P01762 117 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 IL9P15248 144 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 HERVK_113P63121 156 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 HLA-DRB4P13762 266 aa4.17□□□□□ -1.74
SMG1-211ENST00000565324 RPL15P61313 204 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms