RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TMEM147Q9BVK8 224 aa6.03□□□□□ -1.44
CAPN3-213ENST00000565173 STRAPQ9Y3F4 350 aaKnown RBP6.03□□□□□ -1.44
CAPN3-213ENST00000565173 MUC4Q99102 2169 aa6.03□□□□□ -1.44
CAPN3-213ENST00000565173 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 FAM25EA8MYX2 175 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 CCSO14618 274 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 PRAF2O60831 178 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 CCNKO75909 580 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 PTTG1O95997 202 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 FAM3BP58499 235 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-213ENST00000565173 PLP1P60201 277 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 B2MP61769 119 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 POLR2GP62487 172 aaKnown RBP eCLIP6.02□□□□□ -1.45
CAPN3-213ENST00000565173 AKR1C1Q04828 323 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 IAH1Q2TAA2 248 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-213ENST00000565173 PATE2Q6UY27 113 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 BAP18Q8IXM2 172 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 ZNRF2Q8NHG8 242 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 TMEM208Q9BTX3 173 aa6.02□□□□□ -1.45
CAPN3-213ENST00000565173 A0A087X0K7 114 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 C5orf51A6NDU8 294 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 MRPS12O15235 138 aaKnown RBP6.01□□□□□ -1.45
CAPN3-213ENST00000565173 HYPMO75409 117 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 INSP01308 110 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 DEFB130BP0DP73 79 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 DEFB130AP0DP74 79 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 PRB4P10163 310 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-213ENST00000565173 RPL7P18124 248 aaKnown RBP6.01□□□□□ -1.45
CAPN3-213ENST00000565173 CXCL3P19876 107 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 FGL1Q08830 312 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 RGS21Q2M5E4 152 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 SOHLH1Q5JUK2 328 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 TMEM14EPQ6UXP3 125 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 ZBTB8BQ8NAP8 495 aaPredicted RBP6.01□□□□□ -1.45
CAPN3-213ENST00000565173 OR8A1Q8NGG7 326 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 SMIM8Q96KF7 97 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 UHRF2Q96PU4 802 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 PSENENQ9NZ42 101 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 GSKIPQ9P0R6 139 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 HIGD1AQ9Y241 93 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 DNAH5Q8TE73 4624 aa6.01□□□□□ -1.45
CAPN3-213ENST00000565173 SMCO3A2RU48 225 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 CBY3A6NI87 242 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 F5H768 121 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 BOLA2-SMG1P6H3BVE0 249 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 K7EPK0 472 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 GOSR2O14653 212 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 SSNA1O43805 119 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 LINC00869P0C866 280 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 S100A7P31151 101 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 TAS2R60P59551 318 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 RAP2BP61225 183 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 SELENOTP62341 195 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 TNP2Q05952 138 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 PSG3Q16557 428 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 ZNF738Q8NE65 137 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 LINC01587Q99440 93 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 NPVFQ9HCQ7 196 aa6□□□□□ -1.45
CAPN3-213ENST00000565173 NBDYA0A0U1RRE5 68 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 FNDC10F2Z333 226 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 SSSCA1O60232 199 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 OR5G3P0C626 314 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 METTL15P1P0C7V9 234 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 RRAS2P62070 204 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-213ENST00000565173 DLK1P80370 383 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-213ENST00000565173 ARL16Q0P5N6 197 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 KIR3DS1Q14943 382 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 TMEM256Q8N2U0 113 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
CAPN3-213ENST00000565173 RNF141Q8WVD5 230 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 RPUSD4Q96CM3 377 aaKnown RBP5.99□□□□□ -1.45
CAPN3-213ENST00000565173 C2orf50Q96LR7 162 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 ATG101Q9BSB4 218 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 ARL6Q9H0F7 186 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 ARV1Q9H2C2 271 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 LINC00588Q9Y4M8 146 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 ALG5Q9Y673 324 aa5.99□□□□□ -1.45
CAPN3-213ENST00000565173 C7orf66A4D0T2 115 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 PRAC2D3DTV9 90 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 SIX6O95475 246 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 NUDT3O95989 172 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 MBPP02686 304 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-213ENST00000565173 ATP5G1P05496 136 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 SNRPCP09234 159 aaKnown RBP5.98□□□□□ -1.45
CAPN3-213ENST00000565173 HTN1P15515 57 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 ATP5G3P48201 142 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 RHOBP62745 196 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 SLC38A11Q08AI6 406 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 MORN5Q5VZ52 161 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 TEPPQ6URK8 271 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 ZNF493Q6ZR52 646 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 C6orf223Q8N319 242 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 TMEM37Q8WXS4 190 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 C16orf74Q96GX8 76 aa5.98□□□□□ -1.45
CAPN3-213ENST00000565173 NOP10Q9NPE3 64 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms