RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 SIGLEC15Q6ZMC9 328 aa12.21□□□□□ -0.45
GTF3C1-205ENST00000564747 ZNF491Q8N8L2 437 aa12.21□□□□□ -0.45
GTF3C1-205ENST00000564747 TMEM191AQ9H0A3 160 aa12.21□□□□□ -0.45
GTF3C1-205ENST00000564747 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.45
GTF3C1-205ENST00000564747 SLC25A34Q6PIV7 304 aa12.21□□□□□ -0.46
GTF3C1-205ENST00000564747 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.46
GTF3C1-205ENST00000564747 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.46
GTF3C1-205ENST00000564747 H3BRN7 92 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 M0R3E3 92 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 LY6HO94772 140 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 IL4P05112 153 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 HTR1DP28221 377 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 CRIP1P50238 77 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 H0Y8G0 127 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 GRNP28799 593 aaKnown RBP12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 RNF151Q2KHN1 245 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
GTF3C1-205ENST00000564747 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 ARF6P62330 175 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 COTL1Q14019 142 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 RNF5Q99942 180 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 LIPFP07098 398 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
GTF3C1-205ENST00000564747 TRBV6-1A0A0K0K1D8 114 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 TAX1BP3O14907 124 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 PSG3Q16557 428 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 ANKHD1Q8IWZ3 2542 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 ZNF414Q96IQ9 312 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 MAP1LC3CQ9BXW4 147 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 NEU4Q8WWR8 484 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 A0A1W2PRD5 423 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 A0A1W2PRF3 423 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 A0A1W2PRM7 423 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 RHOGP84095 191 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 SRSF8Q9BRL6 282 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-205ENST00000564747 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 NBR2O15453 112 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 KLRD1Q13241 179 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 DEFB125Q8N687 156 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 C8orf49Q96NF6 230 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 RNF24Q9Y225 148 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 OR2T8A6NH00 312 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 K7EQM0 130 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 RIGQ13278 110 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 DPM3Q9P2X0 92 aa12.17□□□□□ -0.46
GTF3C1-205ENST00000564747 FAM90A27PA6NNH2 459 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 PET117Q6UWS5 81 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 LYPD1Q8N2G4 141 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 CFHR4Q92496 578 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 WI2-2373I1.2A0A1W2PRP0 233 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 GNG7O60262 68 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 HES1Q14469 280 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 SPTA1P02549 2419 aa12.16□□□□□ -0.46
GTF3C1-205ENST00000564747 CBY3A6NI87 242 aa12.15□□□□□ -0.46
GTF3C1-205ENST00000564747 HSPB8Q9UJY1 196 aa12.15□□□□□ -0.46
GTF3C1-205ENST00000564747 FANCD2OSQ96PS1 177 aa12.15□□□□□ -0.46
GTF3C1-205ENST00000564747 NBASA2RRP1 2371 aa12.15□□□□□ -0.47
GTF3C1-205ENST00000564747 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
GTF3C1-205ENST00000564747 AP5S1Q9NUS5 200 aa12.14□□□□□ -0.47
GTF3C1-205ENST00000564747 MS4A6AQ9H2W1 248 aa12.14□□□□□ -0.47
GTF3C1-205ENST00000564747 CST9LQ9H4G1 147 aa12.14□□□□□ -0.47
GTF3C1-205ENST00000564747 NDUFA3O95167 84 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 FAM106CPP0CH98 169 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 RPS20P60866 119 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 FAM106AQ4KMX7 169 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 AMMECR1LQ6DCA0 310 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 NPBQ8NG41 125 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 OR11H6Q8NGC7 330 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 HRNRQ86YZ3 2850 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 A0A087X0K7 114 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 PPBPP02775 128 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 HIST1H1AQ02539 215 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 PTPRQQ9UMZ3 2332 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 F8W735 103 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 LYZL1Q6UWQ5 148 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 GATD1Q8NB37 220 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 VPS25Q9BRG1 176 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
GTF3C1-205ENST00000564747 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
GTF3C1-205ENST00000564747 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms