RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MIC13Q5XKP0 118 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 TMEM252Q8N6L7 170 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 LRRC20Q8TCA0 184 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 TMEM37Q8WXS4 190 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 WDR83OSQ9Y284 106 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 KMT2AQ03164 3969 aa14.31□□□□□ -0.12
SHCBP1-203ENST00000564272 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 SIX6O95475 246 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 TCTAP57738 103 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 PRR20EP86478 221 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 PRR20CP86479 221 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 PRR20DP86480 221 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 PRR20BP86481 221 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 PRR20AP86496 221 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 VWC2Q2TAL6 325 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 C10orf113Q5VZT2 155 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 IGF2BP2-AS1Q96M15 143 aa14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 GPN1Q9HCN4 374 aaPredicted RBP14.3□□□□□ -0.12
SHCBP1-203ENST00000564272 DEFB131BA0A096LNP1 70 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 TMEM189A5PLL7 270 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 HBE1P02100 147 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 SPART-AS1P0CW21 52 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 HIST1H1AQ02539 215 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 RAB31Q13636 194 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 OPCMLQ14982 345 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 PSG3Q16557 428 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 STX12Q86Y82 276 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 RNF24Q9Y225 148 aa14.29□□□□□ -0.12
SHCBP1-203ENST00000564272 LOC102723971A0A1B0GUV8 181 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 H3BTX0 84 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 CRXO43186 299 aaPredicted RBP14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 BAXQ07812 192 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 BAP18Q8IXM2 172 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 OR8A1Q8NGG7 326 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 TMEM208Q9BTX3 173 aa14.28□□□□□ -0.12
SHCBP1-203ENST00000564272 BOLA2-SMG1P6H3BVE0 249 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 SLC17A3O00476 420 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 INSP01308 110 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 AMBPP02760 352 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 CXCL2P19875 107 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 S100A11P31949 105 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 HBG1P69891 147 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 HBG2P69892 147 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 FAM222AQ5U5X8 452 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 LCN15Q6UWW0 184 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 Q6ZRG5 221 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 BPIFA4PQ86YQ2 179 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 RPUSD4Q96CM3 377 aaKnown RBP14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 RNF126Q9BV68 326 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 DNAJC4Q9NNZ3 241 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 ZNF331Q9NQX6 463 aaPredicted RBP14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 DKK2Q9UBU2 259 aa14.27□□□□□ -0.13
SHCBP1-203ENST00000564272 TRAV12-2A0A075B6T6 113 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 TRAV5A0A0B4J249 113 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 PRM2P04554 102 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 FGF7P21781 194 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 B2MP61769 119 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 RHOBP62745 196 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 RRN3P1Q2M238 152 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 SLC50A1Q9BRV3 221 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 SLC39A9Q9NUM3 307 aa14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 YTHDF2Q9Y5A9 579 aaKnown RBP14.26□□□□□ -0.13
SHCBP1-203ENST00000564272 VPS13DQ5THJ4 4388 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 PRAF2O60831 178 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 IGLC2P0DOY2 106 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 LRRC37A5PQ49AS3 106 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 OR1L4Q8NGR5 311 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
SHCBP1-203ENST00000564272 ZNF705GA8MUZ8 300 aaPredicted RBP14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 H3BQ15 152 aa14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 RPL29P47914 159 aaKnown RBP14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 NIPSNAP3BQ9BS92 247 aa14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 OR5AC2Q9NZP5 309 aa14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 PXMP4Q9Y6I8 212 aa14.24□□□□□ -0.13
SHCBP1-203ENST00000564272 TEX48A0A1B0GUV7 120 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 NHLH2Q02577 135 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 ATP6V1FQ16864 119 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 PFDN5Q99471 154 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 NMES1Q9C002 83 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 PPP1R14DQ9NXH3 145 aa14.23□□□□□ -0.13
SHCBP1-203ENST00000564272 PRAC2D3DTV9 90 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 H0YIZ8 118 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 CHAC2Q8WUX2 184 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 MARVELD1Q9BSK0 173 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 NPCDR1Q9BY65 106 aa14.22□□□□□ -0.13
SHCBP1-203ENST00000564272 E5RGE8 158 aa14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 H2BFSP57053 126 aa14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 GCSAMLQ5JQS6 135 aa14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 OR5C1Q8NGR4 320 aa14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 SAT2Q96F10 170 aaPredicted RBP14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 NDUFAF3Q9BU61 184 aa14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 PARD6GQ9BYG4 376 aaPredicted RBP14.21□□□□□ -0.13
SHCBP1-203ENST00000564272 RLN2P04090 185 aa14.2□□□□□ -0.14
SHCBP1-203ENST00000564272 HTN3P15516 51 aa14.2□□□□□ -0.14
SHCBP1-203ENST00000564272 DEFA1P59665 94 aa14.2□□□□□ -0.14
SHCBP1-203ENST00000564272 DEFA3P59666 94 aa14.2□□□□□ -0.14
SHCBP1-203ENST00000564272 CLINT1Q14677 625 aa14.2□□□□□ -0.14
SHCBP1-203ENST00000564272 SLC25A31Q9H0C2 315 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms